Salvia splendens (scarlet sage): 121774673
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Entry
121774673 CDS
T07627
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121774673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121774673
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121774673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
121774673
NCBI-ProteinID:
XP_042027461
LinkDB
All DBs
Position
17:complement(4179483..4184370)
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AA seq
470 aa
AA seq
DB search
MRMALNNSRPHGSTYEDENKWLLQREGLQGRQVTDSLREKFKNKPWLLEDETGQFQFHGH
LEGTQTATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMNNRRKTADGYQR
WMMKAANNGATAFGEVEKFDNREGAAGGGRGRKKTTGDDDEANASDRGEEDEDEESARRS
RLGLNKKSGDDDEGLRGGDLDFDDDDIEKGDDWEHEEIFTDDDEAVGIDPEEREDLAPEI
PAPPEIKQDDEDEDEADEEDKEGGLSKSGKELKKLLGRANGLNDSDSEDDDDDDDDADDD
ISPGLTPKKEAPKEEPVHNNTPLKATNSTAGRGTPPTSKSSKGKRKVSNEDLKTPNSSPL
KKVKPENETKVIKDENVSSSKGVAHPKGATPPASSKSVPAPATGPVTEDEIRAVLLPKTP
VTTKDLLAKFRSRLKTKEEKDAFSGIMKRISKIQKTNGATNYVVLRDNLS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcggatggccttaaacaactcgaggccacacggttccacctacgaggatgagaataaa
tggttgttgcagagagaaggtttgcaggggcgccaagtgactgatagtttgagggagaag
tttaagaataaaccttggctactggaagatgaaactggccagtttcagttccatggtcac
cttgagggcacacagacagccacatattatcttctaatgcttcaaggaaaggaatttgtt
gctattcctgctggttcctggtacaactttaacaaagtggcacaatataagcaactcact
ttggaggaagctgaggaaaagatgaacaatagaaggaaaacagctgatggttaccagaga
tggatgatgaaagcagcaaacaatggagctacagcctttggtgaggtcgagaagtttgac
aatcgggaaggtgcagctggtggtgggagggggcgcaaaaaaactacaggggatgatgat
gaagccaatgcttctgatagaggagaagaagatgaagatgaagagtcggcaagaagaagc
aggttgggtctcaacaagaaaagtggggatgatgatgaaggtctaagaggtggtgacctt
gactttgatgatgacgatattgagaagggtgatgattgggagcatgaagaaattttcaca
gacgacgatgaagcagttggaattgatcctgaggaaagggaagatttggcccccgagatc
cctgcacctccagaaattaagcaggatgatgaggatgaggatgaagctgatgaagaagat
aaggagggagggctcagtaaatctggaaaagagctgaagaagcttcttggacgagcaaat
gggctgaatgattctgattcagaggatgacgacgacgacgatgatgatgcggacgatgat
atatctcctggtctcaccccaaaaaaggaagctccaaaagaagagccggttcataacaac
actccccttaaagcaacaaattctacagctggtcgtgggacaccacctacttcaaaatcg
tccaaggggaaaagaaaagttagcaatgaggacttaaaaacacctaatagttcaccttta
aagaaagttaaaccagaaaatgaaacaaaagttataaaagacgagaatgtttcatcctca
aaaggcgttgctcatcctaaaggtgcaacgccacctgcatcatcaaaaagtgtgccagca
ccagcgactggaccagttactgaagatgaaattagggctgttctactgcctaagacgcca
gtgaccactaaggatcttctggctaaattcagatccagactgaagacgaaagaggaaaag
gatgcgttttcaggtataatgaaaaggatatcaaagatccaaaagaccaatggtgcaaca
aactacgtagttctaagagataatttgtcgtaa
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