Salvia splendens (scarlet sage): 121774727
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Entry
121774727 CDS
T07627
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121774727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121774727
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121774727
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
121774727
NCBI-ProteinID:
XP_042027533
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Position
17:complement(4194947..4199101)
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AA seq
547 aa
AA seq
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MKTAREESVNATIEEGEAKRQKLDQSSPQLAFENPLLPLASYEDVEEEVEERRDGGRVRD
MNHGKREGQNGHIEDEDDEDDEDTKAGQGRRHRSIEVRRDCPYLDTVNRQVLDFDFEKFC
SVSLSNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVYINLCTEKVYCLPDGYEVIDP
SLDDIRHVLNPRFTRENVIQIDQNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLM
RVTPLRNFFLIPENYSHCKSQLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASGKTY
RIGAQSDPVRFISWLLQTLHRDLRRSKKGSSIIHQCFQGELEVVKEIHNKHIGEKKDNGD
DCGNEVGNVIMETSKMPFLMLGLDLPPPPLFKDIMEKNIIPQVPLFNILKKFDGETVTEV
VRPHTARMRYRVTKLPKYLILHMLRFTRNNFFVEKNPTLVNFPVKNLELKDYIPLPVPRD
NEKLRSKYDLIANIVHDGKPGGGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM
QIYEQQQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcacgagaagaatccgtgaatgcaacaatcgaagagggcgaggcgaagagg
cagaagctagatcaatcttcgccgcagcttgctttcgaaaacccgctccttccgctggct
tcgtacgaagatgttgaggaggaagtggaagagcggagagatggcggtagggttagagat
atgaatcatggcaaaagggaaggtcaaaacgggcatattgaagatgaagatgatgaagac
gatgaagatactaaagcagggcagggacgacgccatcggtcgattgaagtaagaagggac
tgcccctatctcgatactgttaatagacaggttttagattttgatttcgagaaattttgc
tcagtatccctttccaacttgaatgtctatgcatgtttggtgtgtgggaagtatttccag
ggaagaggaccaaaatctcacgcatatacccatagtcttgaagctggacaccatgtctac
attaatctctgtacagaaaaagtttactgtcttcctgatggatatgaagtcattgacccg
tcattggatgacatccgccatgtactaaacccaaggtttacgagagaaaatgttattcag
attgaccagaatcgtcagtggtccagggcgcttgatggttctgattatctccccggaatg
gtgggattgaataatatcaaagagactgattttgtcaatgtcaccattcaatctttgatg
cgtgttactcccttgaggaacttctttcttattccagagaactactcccattgcaaatcc
caactcgttcatcgatttggagagctcactcgaaagatctggcatgcaaggaactttaag
ggacaggtcagtccgcatgaatttctccaggcagttatgaaggctagtgggaaaacatac
cgaataggtgctcaatcagatccagttagatttatctcatggcttctacaaactttgcat
cgagatcttagaagatctaaaaagggaagcagcatcattcaccagtgctttcagggtgag
ctggaggttgtcaaggagatccacaacaagcatataggagagaaaaaagataatggagat
gattgtggaaatgaagtgggtaatgtcatcatggagacaagcaaaatgccattcctaatg
cttgggttggacttgccaccacctccactttttaaggacattatggagaagaacattatt
cctcaggttccacttttcaacatactcaagaagtttgatggcgaaactgtgactgaagtg
gttcggcctcacacagcaaggatgagatatcgtgtcacgaaattgccaaagtatcttatt
ctccacatgcttcggtttacaagaaacaacttttttgtcgagaaaaatcctacactcgtt
aatttccctgtgaagaatctggaactgaaagattacattccccttcctgtaccgagggat
aatgagaagttgcgttcaaagtacgacttgatagctaatattgttcacgacggtaaaccg
ggtggaggatcatatagagtatttgtgcagcgaaagtcggaagaactatggtacgagatg
caggatcttcatgtgtcggagacgttgccacaaatggtcgccctctccgaggcctacatg
cagatttatgagcagcagcagtag
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