Salvia splendens (scarlet sage): 121774962
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Entry
121774962 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121774962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121774962
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121774962
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
121774962
NCBI-ProteinID:
XP_042027818
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Position
17:2850598..2854733
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AA seq
590 aa
AA seq
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MDPEPKKGDDSPSNSCNSHGPLHPQSPFPDEVLEKVLSFVDSHKDRSSISLVRKDWYNAE
RWTRSKLFIGNCYAVSPEIVARRFRRIKSVTLKGKPRFSDFNLVPLDWGANVYPWLVMFA
KVYPFLEELRLKRMTITDEGLELLAKSFPRFKALSLSSCDGFTENGLKAIASHCRNLTEI
NIQDSITEDVGGGWLSCFPENFSSLEILNFSILNGDVNFNDLERLVSRCKLLRVLKVNES
ITLDELQRLLVHGPRLTELGTGSFPQELTPRQYEDIETAFCNCRNLQVLSCLWEATSVYL
PLLYGACASLTFLNLSVAPLQSGEFAKFLAHCPNLRCLWVIDTVEDKGLEAVGLSCPLLE
ELRVYPADPDDRDHRDGVTELGFLAVSRGCPKLHYVLYFCRRMTNAAVVTIVQNCPNFTH
FRLCIMTPRQPDYLTNEPMDEAFGAVVKTCTKIKRLSVSGLLTDQTFEYIGQYAKDLETL
SVAFAGSSDWGMQCIMEGCPKLRKLEIRDCPFGDAALLSGREKYERIRSLWMSACRVTMK
GCKLLARESPRLNVEVIREEGGNEDQALKVYLYRSVAGPRKDAPPFVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaaccgaagaaaggggatgattcgccttcgaactcttgcaactctcatgga
ccactccaccctcaatcaccattcccggatgaagtgttggagaaagtcctgtcgttcgta
gattcgcataaagacaggagctcaatctcgcttgtgcgcaaagattggtataacgctgag
agatggacaagatcaaagctttttattggaaactgctatgcagtgtcaccagaaatagtg
gctagaaggtttcgaagaattaagagtgttacacttaaagggaagccaagattttcggat
tttaatttggtgccactggattggggtgctaatgtgtacccatggttggttatgtttgcc
aaagtttaccctttcttggaggagctgaggcttaagaggatgaccatcaccgatgagggc
ctggagctcttggcgaagtcattccctcgcttcaaggccttatctttgtcaagttgtgat
ggattcactgaaaatgggctcaaagcaattgccagtcattgcaggaacttgactgagatc
aacatacaggacagtataacagaggatgtcggtggaggttggttgagttgcttcccagaa
aacttttcttcgctggaaatacttaacttttctattcttaatggtgatgtaaactttaat
gacctggagagacttgttagccgatgcaaactattgagagttctgaaggtcaacgagagc
attaccttggatgaattgcaacggctgcttgtgcacggccctagactaacagagcttggc
actggctccttcccgcaagaactcacacctcgccaatatgaagacattgaaactgcgttt
tgtaattgtagaaatctccaggttctttcgtgtttgtgggaagcaacttctgtatatctc
cctcttctttatggagcttgtgccagcctgactttcttgaacttgagtgttgcgcccctc
caaagtggtgaatttgcaaagtttcttgctcactgccccaatttacgatgcctttgggtc
attgatacagtcgaagacaaggggcttgaggctgttggtttgagctgtcccttacttgag
gagctacgggtctaccctgctgatccagatgaccgggatcatcgtgatggggtgacagaa
ttgggtttcttggcagtgtctcgtggatgccccaaactccactatgttctctacttctgt
aggagaatgactaatgctgctgttgtgaccatagtgcagaactgccccaatttcacccac
ttccgtctatgcattatgaccccgcgccaaccagactatctcacaaatgaacccatggat
gaggcctttggcgctgttgtcaaaacctgcacgaaaatcaagaggctttcagtttcaggc
cttctaactgaccagacatttgagtacattggccagtacgcgaaagatcttgagacactg
tcggtggcctttgctggaagcagtgattggggaatgcagtgtatcatggaaggctgtcct
aagctgaggaagctcgagatcagagattgcccctttggagacgctgccctgctgtctgga
cgagagaagtatgagaggatacgatcgttgtggatgtctgcgtgccgtgtgacaatgaaa
ggctgcaaactgctcgcgagggagtctccaaggctcaacgttgaggtgataagagaggaa
ggaggcaacgaagatcaagccctcaaagtctacctctatcgctctgtagcagggccaagg
aaggatgccccgccattcgttctcacactttga
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