Salvia splendens (scarlet sage): 121775101
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Entry
121775101 CDS
T07627
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121775101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121775101
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121775101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121775101
NCBI-ProteinID:
XP_042028006
LinkDB
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Position
17:complement(4382155..4386095)
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AA seq
475 aa
AA seq
DB search
MEMEPGKLFIGGISWDTSEERLREYFQTFGEVVEAVIMKDRTTGRARGFGFIVFADASVA
EKVVKERHVIDGRTVEAKKAIPRDDHQNFNRNNASIHGSIQASPSPVRTKKIFVGGLASS
VTENDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDLEEAVDKVLFKTFHELNGKMV
EVKRAVPKELSPGPTRNQPSGYNYGLNRVSTFLNTYSPGHNSSSPSGYGMRMDGRFSPVA
VGRSGYPPYNTANFSMGVNPDPGFGLNGMASADSGFGYGRGMNSYYSGNTDRFGSPVHYD
GGVTGNGPMLNTNGRNLWGNGNLNYASNPMTSNAFVGSGTGNAGGLGSIGEIWGTTPTSS
QGGGNASFSTENFGYGTREMNIGGRAGYGRNNGSTVGTTSSYSAPNNIRDGGLGNMYERE
SFYAGHAWQPPSPEHDGSDPFGYELGVAADAAPNNSVGYVGGYSVNARTNRGIAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcctgggaagctattcattggtgggatttcatgggacaccagtgaggag
cgtttgagggagtattttcagacttttggtgaagtagttgaagcggtgatcatgaaggat
cgcaccactggccgtgctcgcggctttggtttcattgtttttgctgatgcttctgttgct
gagaaagttgtcaaggaaaggcacgtcatagacggaagaactgtggaagcaaagaaggct
attccgagagatgatcatcaaaacttcaacagaaacaatgctagcatccatggcagcatc
caagcgtcccccagtcctgttcgtacaaaaaagatttttgtaggaggtttagcatcctca
gtcacagaaaatgacttcaagaggtactttgatcaatttggtacgataacagatgttgtc
gtgatgtatgaccacaatactcaaaggcctagaggattcgggtttatcacttatgatttg
gaggaagcagtggataaagtccttttcaaaacttttcatgaactcaatggaaagatggtc
gaggttaagcgtgctgttccaaaggagttatctccaggaccaacgcggaaccaaccgagt
ggctataactacgggctgaacagagtgagcactttccttaatacttacagtccaggacac
aattctagctctccaagtggctatggaatgagaatggatggtcgattcagtcctgtggcg
gtaggtcggagtggatatcccccctacaacacggctaatttcagcatgggtgtgaaccca
gaccctggattcggtttaaatggtatggcaagtgctgattctggctttggctatgggcgt
gggatgaactcttattatagtggaaacacagatcgttttggtagtcccgttcactatgat
gggggtgttactggaaatggccctatgttgaataccaatggtcgaaatttatggggcaac
gggaatctcaactatgcttcaaacccaatgacgtcaaatgcatttgttggctcgggaact
ggaaatgcgggtggtcttggaagtattggggaaatctggggcaccactcctacttcatcc
caaggtggaggaaatgcctccttcagcactgaaaatttcggctatggaacccgagaaatg
aatattggtggtagggcaggttatggtagaaacaatggcagcactgttggcacaacgtct
tcttattctgccccaaacaacatccgtgatggaggtttgggaaacatgtacgagagagag
tccttttacgctggtcatgcttggcaaccaccttctcccgagcatgatggttccgaccct
tttggttacgagcttggtgtcgcagcagatgcagcaccaaacaattctgttggttatgtt
ggaggttatagcgttaatgctaggactaatagagggattgcagcctag
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