Salvia splendens (scarlet sage): 121775297
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Entry
121775297 CDS
T07627
Name
(RefSeq) Fanconi anemia group D2 protein-like isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121775297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121775297
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
121775297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
GatF
Motif
Other DBs
NCBI-GeneID:
121775297
NCBI-ProteinID:
XP_042028290
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All DBs
Position
17:complement(21602135..21618152)
Genome browser
AA seq
1349 aa
AA seq
DB search
MLLEKLPEFFDVDPLVSARGSYSLHLDEDVARLILNQLRWLDFLVDSEAFAEKLLQVLTI
CPHHLKKEIIGSLPEIVGDQNNKTLVNSLQQMLQEDSSIIVPVLDSFSNLNLDDLLQEQV
IMIALSCIRTIDTEHIPYLLRFVLLSAKASNARRIISQIREQLKFVEAPHLPTSQHSKSK
EKSIVDNSKALILDALRSSLHFNNILCMELLKELKSLEEAREHKVVDIWLLTLVFMNGES
LRKSVEKLFKKKIIEGCLQDHMFDQCILSIKDLPKDYLATFLSLSAYLLACKEQRAQEVG
VHIYILLFEESSDAFSRQEVLGALLTHVGSGVCHEVSAALDTVVKLASRKSQELTSLSSH
LTGILDYLEVFNVESLHKVYEIFVCLAVSGQSFPQPYGCSIANEILMILRKQINNSDLLY
KKMGLIGVLKIVSYIADTNNVSLPPLSHRSNYEEAVELLKLSLDSCKQLPLPLILFYEEL
VTTLQNRSLHPAVMEWVGKQVLEFESIYLSDIDSGNLIVQDMPYGLEGELWMNLDGDISP
VCLNIVPLVSPLFRSSSPLQILPTKFVLLSVVERIANQGSLGGIDALLGCPFNLPSSKLL
SGILWQPLTVKQKQICILSLYYAANWIRELLNVFSTQVGNECETISQATKEDIVLKLLKR
LRNLVFIEYLLDNFLKQHPILLPDFCPHSDLSPVVEFDSVGDLEKISQHLKGGEILSRNQ
KKHKGKSLTPSASSNAEEKLKQPTLVDVWRKARSIPSQGTPDEDASVASLKTKQSASEES
HAEKSNMPLDIEISAPLKCLDAQKHKFRPLPVDCLSILACPENNQSSCCADPSAELPLHL
YLLRDLHKKLDLLSPTRKQTLARSFSAPSGFMGMKLTEFFSRIRSLFLYLRRNFDRAVHI
LGEGAEICQEHWITQSSLAANPEIVNTCVSASPILTSVSVFKETVLCFGKMLNLPDLLKE
NSTLLDLLKAFQPTEISECLFQGMQLIPSPGSMDYLYSGAYFFLESVFDVAINFSFTLAS
EVLLTLESMVTSMHTFLTKCLSENGKDPHTRFSKEIIPFFRNKLGSYAHKLLTHKCDRDD
VGGSLKTKGEMIQKILRLYLGNCQSASDTLNDLASSIFPQDLPSANTMEDGSTFPSLCPA
TMSVWYRVMHEENISALNNLVKEISQLEKSRGGAKVEDIQRLLNKILQSVNVVVTLVNMC
RNNDKVSIHAVAVKYGGKFIDTFLKVFDFLEARFQMHKDLILSLIKELQKATKTIQTLCS
EAKGSKQTAITGKIPMTKRAMERFLFHVKALLCKTPSGCSFWMGNLKHKDLMGQVVSSQA
YLDDQSDETNENLAEAIAEDQPMNDVSPE
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttgagaagcttcctgaattctttgatgtggaccctcttgttagtgctcgtggc
tcatactcattgcatcttgatgaggatgtagcaaggttgatactgaatcagttgcgatgg
cttgacttccttgtagactccgaggctttcgctgagaaactgttgcaagttttaactatt
tgcccccatcatttgaagaaagagatcataggttcattgcctgagattgtaggtgaccaa
aataacaaaaccctagtgaattcacttcagcaaatgctccaggaggactcttccattatt
gttcctgttctcgattcattttccaatctcaatttggatgatctgttgcaagaacaggtg
atcatgatagcattatcctgcataaggacaattgatacggagcacattccatacctactg
agatttgtattgctttctgcaaaggcatcaaatgccaggcgaataatctcacagatacgt
gaacagttgaaatttgttgaagcacctcacttgccaacatcacaacacagcaaatctaaa
gaaaaatctattgtagataattctaaagctttgattcttgatgccctgagatctagtctg
cattttaacaatattctgtgcatggagttattgaaagaactgaaaagtttggaggaagct
cgagagcacaaggtggtagatatatggttgcttactcttgtattcatgaatggcgagtcc
ttgcggaagagtgttgaaaaactattcaagaaaaaaattattgagggttgtcttcaagat
catatgtttgatcagtgcattctcagtattaaagatttgccgaaggattatcttgccaca
tttttgtcattatctgcatacttgttggcctgcaaagaacaacgagcccaggaagttggt
gtccacatttatatacttctgtttgaagaatctagtgatgctttttcaagacaagaagtt
ctgggagcactactaacccatgtgggctctggcgtttgccatgaggttagcgctgcttta
gacaccgtagttaagttggcctccaggaagtcccaggagttaacttcgctttcttctcac
ctaactggcatcttggattatttagaggtcttcaatgttgagagcctccacaaggtttat
gaaatctttgtttgtctcgcagtttctggtcaatctttcccacaaccttatggatgctcc
atagcaaatgaaattctaatgattttgaggaaacagatcaataactctgatctgttgtac
aagaagatgggcctgataggagtacttaagatagtttcatacattgcagatacaaataac
gtctctcttccgcctttatcacataggtcaaactatgaggaagcagtggagctcttgaaa
ttgtctttagactcttgcaagcagctcccattaccattgattctgttttatgaagaactg
gttacgacgttgcaaaacagaagtcttcacccagctgtcatggaatgggttggaaaacaa
gttttggaatttgagtcaatttatctatctgatattgatagtgggaacttaattgttcaa
gacatgccttatggtttagaaggagaattgtggatgaaccttgatggcgatatatctccc
gtttgcttaaacattgtgccacttgtttctccattgtttagatcctcttcacctttacaa
attctccctacaaagtttgttttactttctgtggttgagagaatcgccaaccaaggatct
ctaggaggcattgatgctcttcttggttgcccctttaatcttccttcctcaaagctgtta
tctggaattttatggcagcctttgacagtgaaacaaaagcagatttgtattctctctctt
tattatgctgctaactggataagggaattgttaaatgtgttttccacccaagttggcaac
gaatgtgagacaataagccaagcaacgaaggaagacatagtacttaagctattaaagcgc
ttgagaaacctagtatttatcgaatatttattggacaattttctcaaacaacacccaata
cttcttcctgatttctgtcctcactcggatttgtcccctgttgttgagtttgactctgtg
ggtgacttggaaaagattagccagcatctcaaagggggtgaaattttgtcccgaaatcaa
aagaaacacaaaggaaagtccttgacaccatcagccagttcaaatgctgaggaaaaactc
aagcagccaacattagttgatgtatggaggaaagcaaggagcataccgagccaaggaact
ccggatgaggatgcatccgtggcgtccttgaagaccaaacaatctgcatctgaggaaagt
catgctgaaaaatctaatatgcctctagatattgaaatatctgcaccattgaagtgttta
gatgcacaaaagcacaaattcaggccacttccagttgattgcctttccatacttgcatgt
cctgagaataatcaaagttcatgctgtgcagacccatctgctgagctgccactacatctc
tatctcctgcgtgatcttcacaaaaagctggatctcttaagtcccacaagaaaacaaact
ttagcaagaagcttcagtgctccatctgggtttatgggaatgaaattgactgaattcttc
agcaggatacgatctttatttctgtaccttaggagaaactttgatcgggcggtacacatt
cttggagaaggtgctgaaatatgtcaagaacactggataactcagtctagtttggctgca
aatcccgagatagtaaatacatgtgtttcagcatcacctattctgacttctgtatcagtt
tttaaagagacagttctctgctttgggaagatgcttaatctgccggatcttctgaaggag
aattctaccctattagatcttcttaaagccttccagccaacagaaatatctgagtgttta
ttccaaggaatgcaactgattccttcacctgggagtatggactatttatattctggtgct
tatttttttcttgaaagtgtctttgatgtggcaataaacttttcatttacactggcttca
gaagtcttgttgactttagaatccatggttacatccatgcacacattccttactaaatgt
ctgagtgaaaatggaaaggatcctcacacaagatttagcaaggaaatcattccttttttt
cgcaacaaacttgggagttatgcacataagctcttgacgcacaagtgtgatagggatgat
gttggcggtagtttaaaaaccaaaggggaaatgatccaaaagattctacggctttatttg
ggtaactgccagtcagcttctgatacactaaacgatcttgcctcctccatttttcctcag
gatttgccctccgcaaacacaatggaggatggcagtacatttcctagcctttgcccagcg
acaatgagtgtctggtaccgagtaatgcatgaagagaacatatctgcactcaacaatttg
gttaaggaaatttctcagttagagaaatcaagaggtggtgctaaagtggaagatatacag
aggcttctgaacaaaatattgcagtctgttaatgtggttgtaacactggttaacatgtgc
aggaataatgacaaggtgagcattcatgcagtggctgtcaagtatggagggaagttcatc
gatacctttctgaaagtttttgacttcttagaggctcggtttcagatgcacaaggacctc
atactttccctgattaaagagcttcagaaagcaacaaaaaccatacaaacactatgctct
gaagcgaagggatcaaaacaaactgctataactggaaaaattcctatgacaaagagagct
atggaacgatttttatttcacgtcaaagcccttctttgcaaaactccaagtggatgctca
ttctggatgggcaatctaaagcataaggacttgatgggacaagtagttagctcgcaagca
tacttggatgatcagagtgatgaaactaatgaaaatctggctgaggccatcgctgaggac
caaccgatgaatgatgtcagtcctgaatga
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