KEGG   Salvia splendens (scarlet sage): 121775437
Entry
121775437         CDS       T07627                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03013  Nucleocytoplasmic transport
sspl03015  mRNA surveillance pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121775437
  09122 Translation
   03013 Nucleocytoplasmic transport
    121775437
   03015 mRNA surveillance pathway
    121775437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121775437
   03041 Spliceosome [BR:sspl03041]
    121775437
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121775437
    TREX complex
     121775437
Spliceosome [BR:sspl03041]
 Complex C
  Other components
   EJC/TREX
    121775437
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121775437
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 121775437
NCBI-ProteinID: XP_042028452
LinkDB
Position
17:complement(8776920..8780141)
AA seq 279 aa
MASLDMSLDDMIKSRKNTVKGGRGQGRPRRGRGGPGGPSRGGRAPFGAPRRNPLGLNARP
SAHTIAKSFRRTKNLPWHSGLVEESLKSVGLSGLEAGTKLFISNLDVGVSNEDIRELFSE
IGELIRYAIHFDKNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGANAGIP
LSARVNVVGGANGKKRTVVMASGPARSRGGFTPANRGTGQRGRGGLNTGRGGGGRGGSRG
RGRGGGRGRGGAQWRKKVEKSADDLDKELDSYHAEAMQS
NT seq 840 nt   +upstreamnt  +downstreamnt
atggcctctttggatatgtctcttgatgacatgataaagagtagaaaaaatactgttaaa
ggaggcagagggcaaggcaggccacggcgtggaagaggagggcctggagggccatcccgt
ggtggaagggcaccatttggtgctcctcgcagaaatcctcttggactcaatgctcgacct
tcagctcacactattgccaagtcattccgcagaaccaagaacttaccatggcatagtggt
cttgttgaagaaagtctgaagtcagttgggctgtcagggttggaagctggtacaaagtta
tttatttcaaacttggatgttggggtttccaatgaagatataagggagctcttttctgag
attggagagttgattcggtatgctattcacttcgacaaaaatggacgcccaagtggttca
gctgaagtggtttttgcaaggcggagtgatgcatttcaagcactcaaacgttataacaat
gtccagttggatggaaagcctatgaagatagagatagttggtgccaatgcagggatccca
ttgtcagctcgtgttaatgtagtgggaggagcaaatggaaagaagaggacagttgtcatg
gcgtctggacctgctcgttcaagaggtggttttactccggcaaatcgtggcactggacaa
aggggtcgtggaggtttgaacactggacgtggaggtgggggtcgtggcgggagccgtggc
cgtggtcgtggtgggggccgtggtcgtggaggcgcacaatggagaaagaaggtcgagaaa
tctgctgatgaccttgataaggaactcgacagctaccatgctgaggcaatgcagtcttag

DBGET integrated database retrieval system