Salvia splendens (scarlet sage): 121775507
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Entry
121775507 CDS
T07627
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121775507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121775507
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121775507
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
121775507
NCBI-ProteinID:
XP_042028519
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Position
17:8789593..8795311
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AA seq
958 aa
AA seq
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MRTRSKSKLPNSPDEHEATKGDRTDDNETLPNISRDAVGKLLKRVKKGFSKEDVGYLRHC
EPVSPMERGSEEFERGLIGTTGGDDTPQPESRGSEAMECVSDHQTDNEDYGSEWEDGSLH
SFPEDLVNGVSVEFDVLPGSAKRKLIRRATAEEKEVAELVHKAHLLCLLGRGRLIDSACN
NPLIQASLLSLVPKHLLKVADAPNLTARCLSPLVDWVHNNFRVRSTTLDEKSCDLAMTST
LESQEGTPEVVTALSVALFRALNLTTRFVSILDVVSLKHGADKSEHQLEFGSKIERNVFN
SATPMVTGPSNSSASTVKSSPDVGPSCSQTAGRGSGRRKANKSRKDGIQPQDASSTDKPK
ENMSELSVSETTTDTSEQCPVKYEKLKRKGDLEFEMQLKMALAATAIGSSASGAEASTVV
EPSSTSAILTPPSKRMKKFIKDEPETSSGGISTAIGSKKVGAPLYWAEVFCSGENLTGKW
VHVDAINAVIDGEDKVEATAAACRKSLRYVIAFAGNGAKDVTRRYCTKWYKVASRRISST
WWDAVLAPLKELESAATAGISNLESEASGLEKVESSRVANADHGSLPHANGIVGASRELC
AIKVAKSPMKNKCPTNRSSLEDMELETRALTEPLPTNQQAYRTHPLYVIQRWLKKHEILH
PKRPVLGFISGHAVYPRACVQTLHTKDRWLREALQVKTGEVPAKVLNRSLKSIKEEALDD
NNYASVDHLETTTALYGKWQTEPLCIPRAVNGIVPKNERGRVDVWSEKCLPPGTVHLRLP
RVAQVAKRLDVDYASAMVGFEFRNGRCVPSFEGIVVCEEFKDAVLAAYVEEEERREANEK
KRKEAQALSRWYQLLSSIITRQRLNTLYGDGGASSQSINEIPEPSDKCPKTTTAKATQKR
KASPLRQVKTPKEKHDVSPLTPTEDHEHEFVVDEQATSDGLIQIKRCHCGFLLQFEEL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaagcaaatcgaagctcccgaattcaccagatgaacacgaagcaaccaag
ggcgaccgcactgatgataatgagactctccctaatatttctagagatgctgtgggaaaa
cttttgaaaagggttaagaaagggtttagcaaagaagatgttggttatctgcgtcactgt
gagccagtttcaccgatggagagaggatcagaggagtttgagagagggcttatcggtaca
actggtggagatgatacacctcagcctgaatctcgcggtagtgaagcaatggagtgtgta
tctgaccatcaaacagacaatgaggattatggttctgaatgggaagatggttcgcttcat
tcatttccagaggatttagtgaatggagtttctgttgagtttgatgttttgcctgggtca
gcaaagcggaagcttatccggcgagccactgcagaagaaaaggaagtcgctgagcttgtg
cacaaagctcatttgctttgcctactgggaaggggaaggttgattgatagtgcttgtaat
aaccctctcattcaagcttcccttctttctcttgttccaaaacatttattgaaggtagca
gatgcgccaaatcttactgctagatgtttgtccccccttgtcgattgggtccacaacaat
ttccgtgttagaagcacaactttggatgaaaaatcatgtgatttagcgatgacatctacg
ttggaaagccaagaggggacaccagaagtggttacagcgttatccgtggcactttttagg
gctctgaatctgaccactaggtttgtctccattttggacgtggtctccttgaagcatggt
gctgacaaatcagagcatcagttggaatttggtagcaagatagagagaaatgtatttaac
tctgcaactccaatggttactggacccagcaattcttctgcttctactgtcaaatcatct
cctgatgttgggccgagctgcagtcagactgctgggagaggttctggcaggcggaaggct
aataaatcaagaaaggatggaatccaacctcaagatgcttcaagtaccgataagcctaaa
gagaatatgtcagagttgtcagtatctgagaccacaactgatacttctgaacagtgcccc
gtgaaatatgagaaattgaaaaggaaaggagatctggaatttgagatgcagctgaaaatg
gctcttgcagctacagcaattggaagttctgccagtggtgctgaggcgtctactgtggta
gaaccatccagcacatctgcgattctcaccccgccttctaaaaggatgaaaaaatttata
aaagatgaacctgaaacatcctcgggtggaatatctacagctattggatcgaaaaaggtg
ggagccccactttattgggcggaagttttctgcagtggagaaaacttgacagggaaatgg
gtgcatgttgatgccatcaatgcagttatagatggagaggataaagtagaagctacagct
gctgcatgcagaaaatctttgagatatgtgattgcttttgctggaaatggtgctaaggat
gtgacccgcagatattgcacaaaatggtacaaggtagcatctcgcagaatcagctcaacc
tggtgggatgcagtattggcacctttaaaggagttggagtcagcagctactgctggtatc
agcaatttggaatctgaagcctcagggcttgagaaggtcgagtcttctcgagtagcaaat
gcagatcatggaagcctacctcatgcaaacggaatagttggagcatccagagagctatgt
gccataaaagttgcaaagtcgcctatgaagaacaaatgtcctactaaccggagctcccta
gaagacatggaactagaaactagagcacttaccgaaccccttcctaccaatcaacaagct
tacagaactcatcccttgtatgtgattcaaagatggcttaagaagcatgaaattttacac
cccaagaggcctgtcttggggtttatttctggccatgctgtatatccacgcgcttgtgtc
caaactcttcatactaaggacagatggctgcgcgaagcactgcaagtgaagactggtgaa
gttcctgctaaggtacttaatcgctctttaaagtctatcaaagaagaagctctggatgat
aataactatgcatctgtggatcatctagagactactaccgctctttatgggaagtggcag
actgaaccactgtgtattcctcgagctgttaatgggattgtgccaaagaatgagcgtggt
cgcgtggatgtctggtctgagaaatgcctcccaccgggtacagtccatctgcgcttgcca
agggtggcgcaggttgcaaaaaggctagatgttgactatgcttctgctatggttggattc
gagttcagaaatggcaggtgtgttccttcattcgagggtatcgtggtttgtgaggagttt
aaggatgctgttctagcggcatatgtagaagaagaagagagaagagaggccaatgagaag
aaaaggaaagaggcacaagcgctatcgaggtggtatcagcttctttcctccatcattacg
agacagagattgaacactctctacggagatggaggagcatcatcgcagtccatcaatgag
atcccagaaccgagtgataaatgccctaaaacaactacagctaaagctacccagaaaagg
aaggcatctccattacgacaagtgaagacacccaaggagaaacacgatgtttcacccctg
acacccacagaagaccacgagcacgagtttgtagtggacgagcaggcaaccagcgatggt
ctgatacaaataaaacgatgccattgtgggttcttattacagtttgaggagttgtag
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