Salvia splendens (scarlet sage): 121775583
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Entry
121775583 CDS
T07627
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121775583
04121 Ubiquitin system [BR:
sspl04121
]
121775583
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121775583
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121775583
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121775583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Prok-RING_4
FAR1_N
zf-RING-like
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
121775583
NCBI-ProteinID:
XP_042028616
LinkDB
All DBs
Position
17:25728134..25730064
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AA seq
384 aa
AA seq
DB search
MSSTYWCHRCNRFLRTWNPESIDCPDCSSGFVEEVEAPPPPSSISDSRQRRFPAAAMYMM
QAPEPCPLPGPASVSSPRLRRSRRNGGDRSPFNPVILLRGGANDGGGGGGAGAGGGGGGF
ELYYDDRAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGMGRIDSNPPASKAAIESM
PTVCIIDRHIAIESHCAVCKEAFELGSNAREMPCSHLYHQDCILPWLSLRNSCPVCRHEL
TAEDNENGNGGADANRGGGNEVGGEDETVGMTIWRLPGGGFAVGRFSGGGRGELPVVYTE
MDGRFNNNGVPRRVSWSSRGSVSRNRGGLRRLLTGFMSCFGRSGSSTSTPRISRWSGSLS
SVFSSPHIRRARAADEAFQRIGEH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctacgtactggtgtcacagatgcaaccgcttccttaggacttggaatccggaa
tccatcgattgccccgattgcagctccggattcgtcgaagaggtcgaagctccgccgccg
ccgtcttcaatttccgactccaggcaacgccgcttccccgccgcggctatgtacatgatg
caggcgcctgagccatgccctcttccagggccggcgtccgtatcgagccctaggctgcga
aggagccgcagaaatggaggcgatcgatcgccgtttaatcctgtcatccttctccgtggt
ggcgccaacgatggcggaggtggtggcggagctggagctggaggcggtgggggagggttt
gagttgtattacgacgacagagcggggtcggggttgcggccgctaccggcgactatgtcg
gagtttttgctaggttcgggtttcgacaggctcctggatcagctatcgcaaattgaggcg
aacgggatggggagaatcgacagcaatcctcccgcatcgaaggccgccatcgagtctatg
ccgaccgtgtgtataatcgatcgccacattgcgattgaatcgcactgcgcggtctgcaag
gaggcgtttgagctggggagcaacgcccgcgagatgccctgcagtcatctgtaccatcag
gactgcattctaccgtggctgtcgttgaggaattcgtgccccgtgtgtaggcacgagctg
acagctgaggataatgagaacgggaatggtggtgcggacgcgaatagaggaggagggaac
gaggtgggaggtgaggatgagacggtggggatgacgatatggagattgcctgggggtggt
tttgcagtggggaggttttccggaggggggagaggcgagcttcccgttgtttacacggag
atggatggcaggttcaataacaatggggtgccgaggagggtttcttggagttctagaggt
agcgtttcgaggaacaggggaggattgaggaggctgttaactggcttcatgtcttgtttt
gggagaagtggatcttccacttctacacctaggattagtcggtggagtgggtcgttgtca
tctgtttttagctctccacatatacgacgagcaagagctgcagatgaggcgtttcaacga
ataggggagcattga
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integrated database retrieval system
