Salvia splendens (scarlet sage): 121775716
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Entry
121775716 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121775716
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121775716
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
121775716
NCBI-ProteinID:
XP_042028676
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Position
18:8065927..8070118
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AA seq
677 aa
AA seq
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MGRKIQCSWNLSCLALLLQIFLLTQCSASRWQKVHKNETDGETYYPPVKLHDFDDHVVLD
NGILNVTLSTPEGMITRITYNGIENLLKQEYNENNRGYWDLVWSSPDHPKEIFDKLDGTN
LFVVHEDEEQVELSFVRTWDSSQTGLLPLNIDKRFIMLRGCPGFYSYAIFERLQGWPDLH
LSQGRIVFKLQENIFQYMAISDDRQRIMPTSEDRNRSQVLDYPEAVLLTNPSNAFLTGEV
DDKYQYSSDNKDSLVHGWIAPDLPTGFWIITPSNEFKTAGPMKQDLTSHAGPIALSMFFS
AHYAGLPLELEFRGGEPWKKVFGPVFVYLNSVQPGQDPLSLWPDAKQQMLVETQHWPYDF
LASDDFPRAKQRGRVSGRLLVRDSFIYKRLMTPSNAYIGLASPGDPGSWQRENKGYQFWS
QCDALGYFKINNIRAGNYSLYAWVPGIIGDYKYNVPINIEPGSKIRLKNLVYDPPRDGPT
VWEIGVPDRSAAEFYVPDPNPALMNQLYNVHPDRFRQYGLWDRYTDLYPDEDLVYSVETS
VYQTDWYFAHVNRNIGNKTYVPTTWRVLFNLTDVDASANYTLRIALASANDAELQVRING
EVGEAPCFTTGLIGKDNSIARHGIHGLYWLYSVSVRGSVLVCGQNAMLLTQLRGSSPWRG
IMYDYIRLEGPSSNIQT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagatacaatgtagttggaatttgagttgcttggctcttcttcttcaaata
ttcttgcttacacaatgttctgcatcaagatggcaaaaggttcacaaaaatgagaccgat
ggggaaacatattaccctccagtaaagttgcatgatttcgacgaccacgtagtcttggac
aatggcatcctcaatgtgactctatcaactccagagggcatgatcactagaataacatac
aatggaattgaaaatctactcaaacaagagtacaatgaaaacaacagagggtattgggat
cttgtttggagctcacctgaccaccctaaagaaatttttgacaagcttgatggaactaat
ctttttgttgtacacgaagacgaagaacaagtggagctctcgttcgttcggacttgggat
tcttcgcagacggggcttcttcccctcaacattgacaaaaggttcataatgctgcgcggg
tgccctggattctactcgtatgcaatattcgagcgcctccaaggctggccggatcttcac
ttgtctcagggaaggatagtgtttaagctacaagaaaatatctttcaatacatggcaata
tcggacgacaggcagaggattatgccaacaagcgaagaccggaacagaagccaggttcta
gactacccggaagcagttctgttaacgaatccaagcaacgctttcctcacaggagaggtg
gacgacaagtaccaatactcgagcgacaacaaggacagtctggtccacggctggatagcc
ccagatcttccaacagggttctggatcatcaccccgagcaacgagttcaagacggccggg
cccatgaagcaggacctcacctcgcacgccggcccaatcgccctgtccatgttcttcagc
gctcactatgccggcctgccgctggagctggagttccggggtggcgagccgtggaagaag
gtgttcggacccgtgttcgtctacttgaactcggttcaacctggccaagatccactctca
ttgtggcctgatgccaagcaacagatgctcgtagaaacgcaacattggccgtatgatttc
ctggcgtcggacgacttccctcgtgccaagcagagaggcagagtaagcggccggttactt
gtccgtgacagttttatctacaaacgccttatgacccctagcaatgcatacattggactt
gcttcccccggggatccaggatcatggcagagagaaaacaagggctatcagttttggagc
caatgtgatgctttaggatacttcaaaatcaataacatcagagctggaaactatagcctc
tatgcttgggtgcccgggatcatcggagactacaagtacaacgttccgatcaacatcgaa
ccaggaagtaagattaggctgaagaatcttgtgtatgatcctccgagggacgggcctaca
gtgtgggaaatcggggtcccagaccgttctgctgctgagttctacgtgcctgatccaaac
ccggctctcatgaaccagctctacaatgtccaccccgacagattccggcagtatggcttg
tgggatcgttacacagatctgtacccggatgaggatttggtgtattcggtcgaaacaagc
gtctatcagacagattggtactttgctcatgtgaatagaaacataggaaacaaaacctat
gtcccaacaacatggagggttctattcaacctcacagacgtcgacgcttcagcaaactac
accctgcggatcgcactggcctcggccaacgatgctgagctgcaggtgaggatcaacggg
gaggtgggagaggctccatgttttacgacggggctaattgggaaggacaattcgattgct
agacatggaatccatggactgtattggctttatagtgtgagtgtaagaggttctgttctt
gtttgtgggcaaaatgcaatgttgttgactcaactaagaggatctagcccttggagaggg
atcatgtatgattatattcgtttagagggtccatcttcgaatattcagacatga
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