Salvia splendens (scarlet sage): 121775808
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Entry
121775808 CDS
T07627
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121775808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121775808
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
121775808
SSDB
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GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
MPSS1_M
Motif
Other DBs
NCBI-GeneID:
121775808
NCBI-ProteinID:
XP_042028808
LinkDB
All DBs
Position
18:complement(925420..931336)
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AA seq
563 aa
AA seq
DB search
MGDKDKEWESHLRSLSSAARDSADPAADPSLLNSVKSLYELCKSDKSDELVARVYPLLNK
IFHRCVASISQTQASSGLLLLAILQFFLDFGDIVLLDAEASLRTFFRSCLSREFADPVVA
EASLAFLSSNKTKLLKAFPTLFPQFFPLMLKLIAWNGEKLKNSFLSIFSGFISPGSFIPL
FPALVDLPILVVALEKVERSSGSLVGSSIASIQKSAAPEMLLALMDEAYTGSMIGDGGAD
SESEDSAPMAAADPIFLDLLKDENEGLAERHWTSPAMASALQAVISTPLSNRLKEALKIA
PQLLDSYFKLAVYDANDSLICALIPLIMARYSTLFPDKMFCYEVQKRLLEFMLSAFHRSP
HFIALLKKPIVDRLGEAYDNPGKTELGLQLCWAIGEYGGGGESHKDAARELFESLELLLY
ENLSASRLGLGEAAHGSGSSSFRKSSQSRLLCFVVTAIAKLATYHRELLPRARVSLAKVA
RSRLSDARVWKRAQDYLGLMNEPAICLSVLGPSTSGKLTQHPGTINWNEGHKKMIAHIPF
YILGGQEGPPPHDFSILDILPTE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggggataaagataaagaatgggaatctcatctccgatccctctcttccgccgccaga
gattccgccgaccccgccgccgatccttcccttcttaattcggtcaagagcctgtatgag
ctctgcaaaagcgataaatcagacgagctggtagctagggtttatccactactcaataag
atatttcatcgctgtgttgcttcaatttcgcaaactcaagcctccagcggcctccttttg
ctggcaattctacaattttttcttgattttggggatatagttttactcgatgctgaagct
agtctgaggacgtttttccgctcctgtttgagccgtgagtttgcagatcctgttgttgca
gaagcatcactagcatttctgagctcaaacaaaacaaaacttctgaaggctttccctaca
ttatttccgcagtttttccctttaatgctgaagctgattgcatggaatggagagaaatta
aaaaactcattcctgagtattttctctggatttatctctcctgggtcgttcattcccctg
tttccagcccttgtagacttacccatattggttgtggcattggaaaaagtggaaagaagt
tcagggtcacttgtgggaagcagcatagcttcaattcagaaaagtgctgcacccgagatg
ctgcttgctctcatggatgaggcatatactggctcaatgataggagatggaggtgcagat
tctgaatctgaagatagtgctcctatggctgcagctgacccaatttttcttgatctcctc
aaggatgagaatgagggccttgctgaacgtcattggacctctcccgctatggcgtcagct
ttgcaggcagtaataagtacccctttgtccaatagactgaaagaagcactgaaaatagct
ccacagcttctcgattcctatttcaaactagcagtttacgatgctaacgattcgttaata
tgtgctttgattcctttgattatggcgagatattcaaccttatttccagacaaaatgttt
tgctatgaggtacagaagaggctcttagaatttatgctttctgcatttcatcgatctcct
catttcattgcacttcttaagaagcctatcgttgacaggcttggggaagcttatgataat
cctggaaagactgagttaggattacagctctgttgggccattggggagtatggaggcggt
ggtgagtctcacaaagatgcagctcgggaactatttgagagtttggaattacttctatac
gaaaatctatcagcaagtcgcctggggttaggtgaagcagcgcatggttcagggagctct
agtttcagaaaatcttcccagtcaaggcttctatgttttgtcgtgactgccatagcaaaa
cttgccacttatcaccgtgagttactgccaagggcccgtgtatctttagcaaaggttgca
cgctctcgactttcagatgcgagggtgtggaagcgcgcccaggattatttgggtttaatg
aatgagcctgcaatatgtttatcagtcttgggcccttctacgtcgggtaaattaacgcaa
cacccaggcaccataaactggaatgaaggccataagaaaatgatagctcatattccattc
tacatcctaggtggtcaagaaggtccccctccccacgacttctcgattctggacattctt
ccgacagaatag
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