Salvia splendens (scarlet sage): 121775913
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Entry
121775913 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL-like isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121775913
09124 Replication and repair
03460 Fanconi anemia pathway
121775913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121775913
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121775913
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121775913
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121775913
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
121775913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
zf-rbx1
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
121775913
NCBI-ProteinID:
XP_042028936
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All DBs
Position
18:5793123..5797309
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AA seq
274 aa
AA seq
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MNSEMEVGSKKFTDKNRCWELEMSSSFCRRIYTEVEEVGWEHLVKLGEDLTFIRFRIMDN
KRRAHIVEITLDKTYPIPRSPPDVPYNSHLEWSSNSRLRDAVQQFQRHVDKLQDFWLTLD
DIDRSFCVIDPKHSHLAVSYRQIKIGSNCCIVLSINVDDPRSLPECRFLGSDTEVNTLRD
IWKQNCKKWTREKSCPENLLHIFGNQLPQPSHLQKSEEQVECGICYAQYLPTDDELGAKS
GTATDYSCENGRCNRAFHSVCLGDWLCSITTTRQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggagatggaagtcggcagcaagaaattcactgacaaaaatagatgctgggag
ctggaaatgtcgtcatccttctgccgcagaatatacacggaggtcgaagaggttggatgg
gagcaccttgtgaaattgggggaagatctgacatttattaggttccgtatcatggacaat
aagaggagagcgcatattgtggagataaccctggataagacctatccaattccaaggtct
ccaccggatgtgccttataattctcatctggaatggtcatcaaactcgagattaagagat
gctgtccagcagtttcagaggcatgtggataagctccaggacttttggctgactttggat
gacattgatcggtctttttgcgttattgatccaaagcactcgcaccttgcagtgtcgtat
cgccagataaaaataggaagtaattgctgtattgtactatctatcaatgtcgatgatcca
agatccttgccagaatgtcgcttccttggttcagatacggaagtcaacactttgagagat
atttggaagcaaaattgtaagaaatggacaagagaaaaatcatgtcctgaaaatcttctg
catatatttggcaatcagttaccacaaccatcacatctccaaaagagtgaggagcaggtt
gaatgtggcatttgttatgcccaataccttccgacagatgatgaacttggtgccaagagt
ggaactgcaactgattattcatgcgaaaatgggagatgcaatcgagcattccacagtgtt
tgtcttggcgattggctctgctctattacgactacaaggcagtaa
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