Salvia splendens (scarlet sage): 121776313
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Entry
121776313 CDS
T07627
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121776313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121776313
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121776313
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
121776313
NCBI-ProteinID:
XP_042029425
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Position
18:22414871..22418917
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AA seq
770 aa
AA seq
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MDFTELEAIEGLRWPWHSWPLSRPEVSALVVPLSVMCTPLTPFSELPILAHDPVNCSQCG
AVWNPYSRVDYTSKIWICPFCYRRNPFPRSYDHINENNIPAELFPTYSTVEYHLGPAPRS
NSDSFSNFSAYSGHGLGLERSGASVGVGPAFVFVVDGCSSEEDLGALKSELLHIVARLPE
NALVGLVVFDAMVRVYDLAFTDCLRVVMFHGGREVSSEKAKELLGLHHMKQSIGKTSSVQ
KQGFLVPVSEYEFNITTAIEEIHSSPVVKPGHRPLRCTGVAIAVAIGLLEGCLINTGSRV
MVFTTGPATVGPGMIVDSDFGSAIRTHRDLNNGYASYHRKSFEYYKQISQRLSESSIVLD
LFACSLDQVGAAELKDPVESSNGFMMLGESFESEEFRKSLRHMFDRDSDGNLEMAFDATI
EIVTSKDVKICGALGPCISLQKKNDTVSEKVIGKGGTHIWKLGTVTSKTCIAFFFEVAGE
QKSQPSSAFFIQFITQYRYSNMGVRKRVTTAARRWVVKHSPEIASGFDQEAAASVMARLA
INKTEEIFAHEVIRWLDKMLIRFSSKFGDYVPEDPSTFRLSTNFSLFPQFMYYLRRSQFM
DVFNSTPDETAYFRLMLNREGVVNSLIMVQPTLFQYSFDGPPIAVVLDICSISSDVILLF
DSFFHVVIHHGSKIAQWRKLGYDKDPSHESFRELLEAVELDAEQLMAGRIPVPKFIKCDQ
HSSQARFLLAKLNPSVTQNSTYKEGSEFIFTDDISLQVFTEHLQALAVQG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaccgaattggaagcgatcgagggtttgcgttggccgtggcactcatggccc
ctctcgaggcccgaagtctcagctctggtcgttccattatcggtaatgtgcactccgctg
acgcccttcagcgagctcccgatcctagctcacgacccggtcaactgctcccagtgcggc
gccgtttggaacccctactcccgcgtcgattacacctccaaaatctggatttgccccttc
tgctaccgtagaaacccttttcctagatcgtacgatcatatcaatgagaacaacatcccc
gcggagctcttccccacttacagcaccgttgagtatcatctaggtccggcgccgagatcg
aatagcgattcgttctcgaatttttctgcctattcggggcatgggttgggtttggagagg
agtggggctagtgttggagttggaccggcgtttgtgtttgttgtggatggttgctcttcg
gaggaggatttaggggctttgaagagtgagttgctgcatattgttgcgcgtcttccggag
aatgctttggttggactggtggtttttgatgcaatggtgagggtgtatgatttggcattc
acagattgtttgagagttgtcatgtttcatggagggcgtgaggtctcgtctgaaaaggcc
aaagagctccttgggctccatcacatgaagcagtctattggaaagacttcatcagtacaa
aagcaaggctttctggttccagtatctgaatacgagttcaatatcaccacagcaattgaa
gaaatccattcttcacctgtggtcaagccaggacatcgacctttacggtgtacaggggtt
gcaatagcagttgctattggactgttagaaggatgcttgataaatactggttcgcgtgta
atggtcttcacaactggacctgcaacagttggccctggaatgattgttgactcagatttt
ggcagtgctattagaactcaccgtgatctcaacaatggttatgcttcctaccatagaaaa
tcttttgaatattacaagcaaatatctcagagattatcagagtcatccatcgttcttgat
ctgttcgcctgctctctggatcaggtcggagcagctgagttgaaagacccagttgaaagc
tccaacggtttcatgatgttaggagagtcgttcgaatctgaggagtttagaaaaagcttg
cgtcacatgtttgatcgtgacagtgatggaaatttagagatggcttttgatgcgaccata
gagatcgtgacttccaaagacgtgaaaatttgtggagcacttggaccttgcatttctctc
caaaagaagaatgatacagtgagtgagaaagtgattggtaaaggtggtacccacatttgg
aaactgggtacagtcaccagcaaaacatgcattgctttcttctttgaagttgcaggtgaa
cagaaatctcaaccgagctctgcatttttcattcagttcataacacaatacagatatagt
aacatgggagttcggaagagggtgacaactgctgcaagaaggtgggtggtgaaacactca
ccagaaattgcttcaggattcgatcaggaagcagctgcttcagttatggctaggcttgcc
atcaataaaacagaagagattttcgcccatgaagtaatcagatggttggataaaatgctg
atacgtttttcatctaaatttggtgattatgtgccggaagacccatcaaccttccgcctt
tcgacaaacttctccctctttccacagtttatgtattacttgagaagatcccagttcatg
gatgtcttcaacagcactccagatgagacggcttatttccgcctgatgctaaaccgtgaa
ggggtggtgaactctcttatcatggtgcagccaaccctgttccagtattcatttgatggg
ccaccgattgcagttgttttggatatatgctccatctcttccgatgtgatattactcttc
gattccttcttccatgtcgtcattcaccatggctctaagattgcgcaatggaggaagctt
ggctatgacaaggatccgagccatgaaagctttagggaactcttggaagctgtggagctt
gatgccgagcagctgatggctggacggatcccagtcccaaaattcataaagtgtgaccag
cacagcagccaggcaaggtttcttcttgctaagctaaatccttctgtcactcaaaattcg
acgtataaagagggttcggaatttatatttactgatgatattagcttgcaagttttcact
gagcacttgcaagccctggctgtgcagggttga
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