Salvia splendens (scarlet sage): 121777132
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Entry
121777132 CDS
T07627
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121777132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121777132
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121777132
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121777132
NCBI-ProteinID:
XP_042030212
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Position
18:12255962..12261618
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AA seq
369 aa
AA seq
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MTDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVLKERSTGRSRGFGYATFVTAEDAKV
ALASEHLLGNRVLEVKVATPKDEMKTTSKKVTRIFVARIPPSVTEAVFRSHFEKYGEITD
IYMPKDPSTKGHRGIGFITFVNAEAVDDLMAETHELGGSTVVVDRATPKEEEFRPVSRAP
QSGGGYGAYNAYINAATRYATLGAPTLYDPPGAMYGREVPRGMGKKIFVGRLPQEATVED
LRHYFGRFGRILDVYVPKDPKRTGHRGFGFVTFADDGVADRVARRSHEICGHQIAIDSAT
PIDDATAAAAGPSGTFPTNNPEPFGYGVPPMRSYGRMYGSLDFDDWGYGVGGSMNGGRPP
RADYRYRPY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccggaagctcgttgtgttgggaattccatgggatgtcgatactgagggattg
agggaatacatgagcaaattcggggagctggaggactgtattgtattaaaggaacgttct
actggacgctctcgtggttttgggtatgcaacatttgttacagccgaggatgcaaaggtg
gcattagcaagtgagcatttacttggcaatagggtgctggaagtcaaagtagccacccca
aaggatgaaatgaaaaccacatctaagaaagttaccaggatatttgtggctaggattcca
ccatcagtaactgaagctgttttcagaagccatttcgagaaatatggcgaaataacagac
atatacatgccgaaggatccatctaccaaaggacatcgtggaattggatttatcactttt
gtgaatgctgaagcagtagatgatctaatggctgagactcatgagttgggcggttcaact
gttgttgtggatcgagcaaccccgaaggaggaagaattcaggccagttagccgagcgcct
caaagcgggggtggatatggtgcttataatgcttatattaatgctgcgactagatatgct
acacttggtgcaccaaccctgtatgatcctcctggtgccatgtatggaagggaggtacct
cgtggaatgggaaaaaaaatctttgttggtaggcttcctcaggaggcaactgtagaagat
cttcgccattattttgggagatttggacgaattttagatgtttatgttccaaaggatccc
aagagaactggtcatagaggatttggttttgtgacttttgctgatgatggtgttgcagat
cgtgtagctcgaagatcacatgagatatgtggacatcagattgcaatagattcagcaaca
ccaattgatgatgctacagctgctgctgctggcccaagtggtactttcccgacgaataat
cctgagccatttgggtatggtgtaccgcctatgcgcagttatggtaggatgtatgggagc
ttagattttgatgattggggttatggtgtcggtggcagtatgaacggaggcagacctcca
cgtgcagattacaggtataggccttactaa
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