Salvia splendens (scarlet sage): 121777249
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Entry
121777249 CDS
T07627
Name
(RefSeq) Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121777249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121777249
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
121777249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
GatF
Motif
Other DBs
NCBI-GeneID:
121777249
NCBI-ProteinID:
XP_042030371
LinkDB
All DBs
Position
18:complement(19735168..19750039)
Genome browser
AA seq
1492 aa
AA seq
DB search
MLSRKRPSKPFVPPFTTPKPTKLLKPTDDEPPASPQPQTTQSTLFHNMASVLADSDCTLI
NPTGPPLLPSDLYAFRQRLHGAFSADSSLRSLFLQGFSVYISSTSNFRRVLLPCQRDGFG
STRSESLVRVLLLVKSIQQDLLDMLLEKLPEFFDVDPLVSARGSYSLHLEEDVARLILNQ
LRWLDFLVNSEAFAEKLLQVLTICPHHLKKEIIGSLPEIVGDQNNETLVNSLQQMLQEDS
SIIVPVLDSFSNLNLDDLLQEQVIMIALSCIRTIDTEHIPYLLRFVLLSAKASNARRIIS
QIREQLKFVGAPHLPTSQHSKSKEKYIVDNSKALILDALRSSLHFNNILCMELLKELKSL
EEAREHKVVDIWLLTLVFMNGESLRKSVEKLFKKKIIEGCLQDHMFDQCILSVKDLPKDY
LATFLSLSAYLLACKEQRAQEVGVHIYILLFEESSDAFSRQEVLGALLTHVGSGVCHEVS
AALDTLVKLASRKSQELTSLSSHLTGILDYLEVFNVESLHKVYEIFVCLAVSAQSCPQPY
GCSIANEILMILRKQINNSDLLYKKMGLIGVLKIVSYIADTNNVSLPPLSHRSNYEEAVE
LLKLSLDSCKQLPLPLILFYEELVTTLQNRSLHPAVMEWVGKQVLEFESIYLSDIDSGNL
IVQDMPYGLEGELWMNLDGDISPVCLNIVPLVSPLFRSSSPLQILPTKFVLLSVVERIAN
QGSLGGIDALLGCPFNLPSTKLLSEILWQPLTVKQKQICILSLYYAANWIRELLNVFSTQ
VGNGCETISQATKEDIVLKLLKRLRNLVFIEYLLDNFLKQHPILLPDFCPHSDLSPVVEF
DSVGDLEKISQRLKGGEILSRNQKKHKGKSLTPSASSNAEEKLKQPTLVDVWRKAGSIPS
QGTPDEDASVASLKTKQSASEESHAEKSNMPLNIEISAPLKCLDAQMHKFRPLPVDCLSI
LACPENNQSSCCADPSAELPLHLYLLCDLHKKLDLLCPTRKQTLARSFSAPSGFMGMKLT
EFFSRIRPLFLYLRRNFDRAVHILGEGAEICQEHWITQSSLAANPEIVNTCVSVSPILTS
VSVFKETLLCFGKMLNLPDLLKENSTLLDLLKAFQPTEISEGLFQGMQLIPSPGSMDYLY
SGAYFFLESVFDVAINFSFTLASEVLLTLESMVTSIHTFLTRCLSENGMDPHTRFSKEII
PFFRNKLGSYAHKLLTHKCDRDDVGGSLKTKGEMIQKILRLYLGNCQSASDSLNDLASSI
FPQDLPSANTMEDGSTFPSLCPATMSVWYRVMHEENISALNNLVKEISQSEKSRGGAKVE
DIQKLLNKILQSVNVVVTLVNMCRNNDKVSIHAVAVKYGGKFIDTFLKVFDFLEAQFQMH
KDLILSLITELQKATKTIQTLCSEAKGSKQTAITGKIPMTKRAMERFLFHVKALLCKTPS
GCLFWMGNLKHKDLMGQVVSSQAYLDDQSDETNDDPAEAIAEDQPMNDVNPE
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccgcaaacggccatccaaacccttcgttccccccttcaccacccccaaacct
accaaactcctcaaacccaccgatgatgaacctcctgcttcaccccaaccccaaaccacg
cagtctactctttttcacaatatggcgtccgtgctggccgactccgactgcacgctcatc
aaccccaccggcccgcctttactcccctccgatctctacgccttccgccaacgactccac
ggagcattctccgccgattcctccctccgctccctctttctccagggcttctctgtttac
atttcttccacctctaatttccgacgggtgttgttaccttgtcagcgcgatggctttgga
tcaacgagaagtgagagcctagttcgagtgctgttattggttaaatcgatccagcaagac
cttttagacatgttgcttgagaagcttcctgaattctttgacgtggaccctcttgttagt
gctcgtggctcatactcattgcatcttgaggaggatgtagcaaggttgatactgaatcag
ttgcgatggcttgatttccttgtaaactctgaggctttcgctgagaaactgttacaagtt
ttaactatttgcccccatcatttgaagaaagagatcataggttcattgcctgagattgta
ggtgaccagaataacgaaaccctagtgaattcacttcaacaaatgctccaggaggactct
tccattattgttcctgttcttgattcattttccaatctcaatttggatgatctgttgcaa
gaacaggtgatcatgatagcattatcctgcataaggacaattgatacggagcacattcca
tacctactgagatttgtattgctttctgcaaaggcatcaaatgccaggcgaataatctca
cagatacgtgaacagctgaaatttgttggagcgcctcacttaccaacatcacaacacagc
aaatctaaagaaaaatatattgtagataactcaaaagcgttgattcttgatgccctgaga
tctagtctgcattttaacaatattctgtgcatggagttattgaaagaactgaaaagtttg
gaggaagctcgagagcacaaggtggtagatatatggttgcttactcttgtattcatgaat
ggtgaatccttgcgaaagagtgttgaaaaactattcaagaaaaaaattattgagggttgt
cttcaagatcatatgtttgatcagtgcattctcagtgttaaggatttgccgaaggattat
cttgccacatttttgtcattatctgcatacttgctggcctgcaaagaacaacgagcccag
gaagttggcgtccacatttatatacttctgtttgaagaatctagtgatgctttttctaga
caagaagttctgggagcattactaacccatgtgggctctggcgtttgccatgaggtaagc
gctgctttagacaccttggtcaagttggcctccaggaagtcccaggagttaacttcgctt
tcatctcacttaactggcatcttggattatttggaggtcttcaatgttgagagcctccac
aaggtttatgaaatctttgtttgtctcgcagtttctgctcaatcttgcccacaaccttat
ggatgctccatagcaaatgaaattctaatgattttgaggaaacagatcaataactcagat
ctgttgtacaagaagatgggcctgataggagtacttaagatagtctcatacattgcagat
acaaataacgtctctcttccgcctttatcacataggtcaaactatgaggaagcagtggag
ctcttgaaattgtctttagactcttgcaagcagctccccttaccattgattctgttttat
gaagaactggttacaacgttgcaaaacagaagtcttcacccagctgtcatggaatgggtt
ggcaaacaagttttggaatttgagtcaatttatctatctgatattgatagtgggaactta
attgttcaagacatgccttatggtttagaaggagaattgtggatgaaccttgatggtgat
atatctcccgtttgcttaaacattgtgccacttgtttctccattgtttagatcctcttca
cctttacaaattctccctacaaagtttgttttactttctgtggttgagagaatcgccaac
caaggatctctaggaggcattgatgctcttcttggttgccccttcaatcttccatccaca
aagctgttatctgaaattttatggcagcctttgacagtgaaacaaaagcagatttgtatt
ctctctctttattatgctgctaactggataagggaactgttaaatgtgttttccacccaa
gttggcaacggatgtgagacaataagccaagcaacgaaggaagacatagtacttaagcta
ttaaagcgcttgagaaacctagtatttattgaatatttattggacaattttctgaaacaa
cacccaatacttcttcctgatttctgtcctcactcggatttgtcacctgttgttgagttt
gactctgtgggtgacttggaaaagattagccagcgtctcaaagggggtgaaattttgtcc
cgaaatcaaaagaaacacaaaggaaagtccttgactccatcagccagttcaaatgctgag
gaaaaactcaagcagccaacattagttgatgtatggaggaaagcagggagcataccgagc
caaggaactccggatgaggatgcatctgtggcgtccttgaagaccaaacaatctgcatct
gaggaaagtcatgctgaaaaatctaatatgcctctaaatattgaaatatctgcacctttg
aagtgtttagatgcacaaatgcacaaattcaggccacttccagttgattgcctttccata
cttgcatgtcctgagaataatcaaagttcatgctgtgcagacccatctgctgagctgcca
ctacatctctatctcctgtgtgatcttcataaaaagctggatctcttatgtcccacaaga
aaacaaactttagcaagaagcttcagtgctccatctgggtttatgggaatgaaattgact
gaattcttcagcaggatacgacctttgtttttgtaccttaggagaaactttgatcgggcg
gtacacattcttggagaaggtgctgaaatatgtcaagaacactggataacccagtctagt
ttggctgcaaatccggagatagtaaatacatgtgtttcagtatcacctattctgacttct
gtttcagtttttaaagagacgcttctctgctttgggaagatgcttaatctgccagatctt
ctgaaggagaattctaccctactagatcttcttaaagccttccagccaacagaaatatct
gagggtttattccaaggaatgcaactgatcccttcacctgggagtatggactatttatat
tctggtgcttatttttttcttgaaagtgtctttgatgtcgcaataaacttttcatttaca
ctggcttcagaagtcttgttgactttagaatccatggttacatccatccacacattcctt
actagatgtctgagtgaaaatggaatggatcctcacacaagatttagcaaggaaatcatt
cctttttttcgcaacaaacttgggagttatgcacataagctcttgactcacaagtgtgat
agggatgatgttggcggtagtttaaaaaccaaaggggaaatgatccaaaagattctacgg
ctttatttgggtaactgccagtcagcttctgattcactaaacgatcttgcctcctccatt
tttcctcaggatttgccctctgcaaacacaatggaggatggcagtacatttcctagcctt
tgccctgcgacaatgagtgtctggtaccgagtaatgcatgaagagaacatatctgcactc
aacaatttggttaaggaaatttctcagtcagagaaatcaagaggtggtgctaaagtggaa
gatatacagaagcttctgaacaaaatattgcagtctgttaatgtggttgtaacactggtt
aacatgtgcaggaataatgataaggtgagcattcatgcagtggctgtcaagtatggaggg
aagttcattgacacctttctgaaagtttttgacttcttagaggctcagtttcagatgcac
aaggacctcatactttccctgattacagagctgcagaaagcaacaaaaaccatacaaaca
ctatgctctgaagcaaagggatcaaaacaaactgctataactggcaaaattcctatgaca
aagagagctatggaacgatttttgtttcacgtcaaagcccttctttgcaaaactccaagt
ggatgcttgttctggatgggcaatctgaagcacaaggacttgatgggacaagtagttagc
tcgcaagcatacttggatgatcagagtgatgaaactaatgacgatcctgctgaggccatc
gctgaggaccaaccgatgaatgatgtcaatcctgaatga
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integrated database retrieval system
