Salvia splendens (scarlet sage): 121777436
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Entry
121777436 CDS
T07627
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121777436
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121777436
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
121777436
NCBI-ProteinID:
XP_042030632
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Position
18:18313740..18316261
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AA seq
449 aa
AA seq
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MASNTLFSLLLLFSFVAGALSTIHNHNHNHKSPILSSAVEKGKLEESSRNSAEPEMFEGV
EEYFNEHAVDDPEEVARMVEMATRNSTKRRKLGFFSCGTGNPIDDCWRCDPNWQRNRRRL
ADCGIGFGRNAIGGRDGRYYVVTDAGDDNPVNPRPGTLRHAVIQDEPLWIVFKRDMVITL
KQELIMNSFKTIDGRGANVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHY
GWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVILLG
HSDSYMRDKSMQATIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTIN
SQGNRYLAPVNPFAKQVTKRLDTAASKWKSWNWRSEGDLLLNGAYFTPSGAGASASYARA
SSLGAKSSSMVGTITSGAGALGCRLGRKC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaacactctgttttcgctgctgctgctcttctcgtttgtcgctggagctctc
tcaacaattcacaatcacaatcacaatcacaaatcacctattttgagcagtgcggttgag
aaagggaagttggaggagagctctcggaattcggcggagccggaaatgtttgaaggagtt
gaggagtatttcaacgaacacgctgtcgatgatccagaagaggttgcaagaatggtagaa
atggcaacaagaaacagcactaagaggagaaaactcggcttcttctcgtgcggaacgggc
aaccccattgacgactgctggcgttgcgaccccaactggcagaggaaccgcaggcgcctg
gctgactgcgggatcggcttcggccgcaacgccataggcggacgcgatggccgctactat
gtggtgacggacgctggcgacgacaaccctgtcaaccctagaccgggcactctgcgccac
gcggtcatacaggacgagcccctgtggatcgtcttcaagcgggacatggtcatcacactg
aagcaggagttgatcatgaacagcttcaagaccatcgacgggcgcggagccaacgtgcac
attgctaatggcgcatgcatcactatccagtttgttactaatgttatcatccacggcttg
cacatccatgattgcaagccgactggtaatgcgatggtgaggagctcgccatcgcattac
ggttggaggaccatggcggatggtgatgccatctccatcttcggctcgagccacatttgg
gtcgaccataactccctctccaactgtgcggatggccttgttgacgcggtcatggggtcc
accgcgatcaccatttccaacaattacttcacacaccacaatgaggttattctgttagga
cacagtgattcctacatgagagacaagtcaatgcaggcgacgattgcgttcaaccatttc
ggagaaggtctcatacagagaatgccaaggtgcaggcatggctacttccacgtcgtgaac
aacgactacactcattgggagatgtacgcgataggaggaagcgcagagcccaccatcaac
agccagggcaacagatacctagcaccggtcaatccctttgcaaaacaggtgacaaagaga
cttgacacggccgcgagcaaatggaagagctggaactggagatcagaaggagacctgttg
ctgaatggggcttacttcacaccatccggagccggagcttcagccagctatgcccgtgct
tcgagtttgggagccaaatcttcctccatggttggaactatcacttccggtgctggggcc
cttggctgccgcctcgggcggaagtgctag
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