Salvia splendens (scarlet sage): 121777649
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Entry
121777649 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121777649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121777649
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121777649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121777649
NCBI-ProteinID:
XP_042030901
LinkDB
All DBs
Position
18:complement(4210677..4214497)
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AA seq
479 aa
AA seq
DB search
MEMELGKLFIGGISWDTSEERLREYFQTFGEVVEAVIMKDRTTGRARGFGFIVFADASVA
EKVVKERHVIDGRTVEAKKAVPRDDHQNFNRNNASIHGSIQGSIQGSPGPVRTKKIFVGG
LASSVTENDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDLEEAVDKVLFKTFHELN
GKMVEVKRAVPKELSPGPTRNQPSGYNYGLNRVSSFLNAYSPGHNSSSPSGYGMRMEGRF
SPVAVGRSGYPPYNTANFSMGVNSDSGFGLNGMASADSGFGYGRGMNSYYSGNIDRFGSP
IHYDGGVAGNGPMLNTNGRNLWGNGNLNYASSSMTSNAFIGSGTGNVSGLGSIREIWGTT
PTSSQGGGNASFSTENFGYGIREMNIGGRAGYGRNNGSTVGSTSSYSAPNNIRDGGLGNM
YDRESFYAGHAWQPPSPGHDGSDPFGYELGGATDAAPNNSVGYVGGYSVNARSNRGIAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcttgggaagctattcattggtgggatttcatgggacaccagcgaggag
cgattgagggagtattttcagacttttggtgaagtagtcgaagcggtgatcatgaaggat
cgcaccactggccgcgctcgcggatttggtttcattgtttttgctgatgcttctgttgct
gagaaagttgtcaaggaaaggcacgtcatagacgggagaactgtggaggcaaagaaggct
gttccgagagatgatcatcaaaacttcaacagaaacaatgctagcatccatggcagcatc
caaggcagcatccaagggtcccctggccctgttcgtacaaaaaagattttcgtaggaggt
ttagcatcctcagtcacagaaaatgacttcaagaggtactttgatcaatttggtacgata
acagatgttgtcgtgatgtatgaccacaatactcaaagacctagaggattcgggtttatc
acttatgatttggaggaagcagtggataaagtccttttcaaaacttttcatgaactcaat
ggaaagatggtcgaggttaagcgtgctgttccaaaggagttatctcctggaccaacgcgg
aaccaaccgagtggctataactacgggctgaacagagtgagcagtttccttaatgcttac
agtccaggacacaattctagctctccaagtggctatggaatgagaatggaaggtcgattc
agtcctgtggcggtaggtcggagtggatatcccccctacaacacggctaatttcagcatg
ggtgtgaactcagactctggattcggtttaaatggaatggcaagtgctgattctggcttt
ggctatgggcgtgggatgaactcttattatagtggaaacatagatcgttttggtagtccc
attcactatgatgggggtgttgctggaaatggccctatgttgaataccaatggtcgaaat
ttatggggcaacgggaatctcaactatgcttcaagctcaatgacgtcaaatgcatttatt
ggctcgggaactggaaatgtcagtggtcttggaagtattagggaaatctggggcaccact
cctacttcatcccaaggtggaggaaatgcctccttcagcactgagaatttcggctatgga
atccgagaaatgaatattggtggtagggcaggttatggtagaaacaatggtagcactgtt
ggctcaacgtcttcttattcagccccaaacaacatccgtgatggaggtttgggaaacatg
tatgacagagagtccttttacgctggtcatgcttggcaaccaccttctcccgggcatgat
ggttccgacccttttggttatgagcttggtggcgctacagatgcagcaccaaacaattct
gttggttacgttggaggttatagcgttaatgctaggtctaatagagggattgcagcctag
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