Salvia splendens (scarlet sage): 121777831
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Entry
121777831 CDS
T07627
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121777831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121777831
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121777831
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
FAZ1_C
VPS38
Motif
Other DBs
NCBI-GeneID:
121777831
NCBI-ProteinID:
XP_042031118
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Position
18:22485134..22487487
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AA seq
284 aa
AA seq
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METPKHTCLKLQLTMGVGEPEAVFVKGTWYPTRFDISITDGLQAWTCHATEEEVKERASC
WDQTASYYIDLAERYLGFQQPGSVYGFSDAGGGCRRLSWTFEKEGMKLEWRWKCHPSPDS
KQTTVDVLDFLMDANIKLSEEVVWKSQSFDKLKQEAEKCLAQSEKLSSEKSEFESEIYGK
FVQVLNSKKAKLRTLRNRLSKQPSAENSPQEEVSSDSRTESLDEGSDEERDGLRAVEKPE
KEQVSSDRTESFDEEDEEVTVKNLGASSSSKNVPTTKPRGRKRK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccgaagcacacatgcttgaagctccaattaacgatgggcgtcggcgaaccc
gaagccgtttttgtgaagggcacctggtacccaacccgattcgacatttccataaccgac
ggcctccaagcttggacttgccatgctactgaggaagaggtgaaggagagagcgtcgtgc
tgggaccaaacggcgtcgtactacatcgacttggccgagaggtatctcggctttcagcaa
cccgggtcggtttacggcttctcggatgctggaggcggatgcagacggttatcatggacg
tttgagaaggaaggtatgaaactggaatggcggtggaaatgccacccttcccccgatagc
aaacaaaccacagtggatgtgctggactttcttatggatgctaacataaagctgagtgag
gaagttgtatggaaatcacagtcgtttgacaagctcaaacaggaggctgaaaagtgcctt
gcacaaagtgagaaactcagcagtgagaaatcagagtttgaatctgaaatatatggaaag
tttgttcaggtcttgaactctaagaaagcaaaacttagaacgctgcgcaataggctctcc
aaacagccttcggctgaaaattcccctcaagaagaagtgtcctcagatagtaggactgag
agcttagacgaaggaagtgatgaagaacgagatgggctgagagctgtcgaaaaacccgaa
aaagaacaagtgtcctcagacaggactgagagcttcgatgaagaagacgaagaagttacg
gttaaaaacttgggtgcatcttcctcctctaaaaacgtcccaaccactaagccccgtggt
agaaaaaggaagtaa
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