Salvia splendens (scarlet sage): 121777878
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Entry
121777878 CDS
T07627
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121777878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121777878
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121777878
Complex B
121777878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
121777878
NCBI-ProteinID:
XP_042031151
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Position
18:complement(16787154..16792356)
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AA seq
199 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANIRSYYQKFEEQQTQILIDQKIKEHLGQ
TVVYQQIGAAYNQHLAAFPGARPRLPVMPPPMFPGPPQMVPGMRPPMLPIPVPGAPGYGN
SPMVPMQPQPAPSLPPQSSGLPPPPSTSAPSPVAGGGQPPSSSGAPPNATQMYNVNPPGT
SATSAPAGGYSYPQYSQTG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggtactactgtgattattgcgacacttacttgactcatgattctccttcagtc
aggaagcagcataattctggctacaaacataaggcaaacataagatcttattaccaaaag
tttgaggaacaacaaactcagattttgatcgatcagaagatcaaggagcatcttgggcag
acagtagtatatcaacagattggtgcagcttataaccaacatcttgctgcttttcccgga
gcaaggccgcgcctacctgtcatgccgcctcctatgtttccgggacctcctcagatggtt
cctggtatgaggcctccaatgctgcctataccagttcctggtgctcctggttatggtaat
tctccaatggtcccaatgcagcctcagcctgctccttcgttgcctccacaatccagtggg
cttccacctccaccaagtacgagtgccccatcaccagttgctggaggaggccaaccccct
agctcaagcggtgcgccacctaatgctactcaaatgtacaatgttaatccacctggaact
tctgctacttctgcacctgctggtggctattcttatccacagtactctcaaaccggttaa
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