Salvia splendens (scarlet sage): 121778085
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Entry
121778085 CDS
T07627
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121778085
03410 Base excision repair
121778085
03420 Nucleotide excision repair
121778085
03430 Mismatch repair
121778085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121778085
03036 Chromosome and associated proteins [BR:
sspl03036
]
121778085
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121778085
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121778085
DNA Replication Termination Factors
ELG1-RFC complex
121778085
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121778085
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121778085
Check point factors
HRAD17(Rad24)-RFC complex
121778085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_16
AAA_assoc_2
AAA_11
DUF815
AAA_22
AAA_5
AAA_14
ATPase_2
RuvB_N
AAA_24
AAA_7
AAA_3
AAA_30
ResIII
DNAX_ATPase_lid
AAA_2
bpMoxR
nSTAND_NTPase5
AAA_19
nSTAND3
AAA_25
SLFN-g3_helicase
Mg_chelatase
AAA_18
RNA_helicase
AAA_28
DUF3086
Motif
Other DBs
NCBI-GeneID:
121778085
NCBI-ProteinID:
XP_042031301
LinkDB
All DBs
Position
19:2399830..2403112
Genome browser
AA seq
364 aa
AA seq
DB search
MAEVIDVMDIDDDNGNFNSARPNLKGKNVVVSAAPPDTRATPWVEKYRPQSLDDVAAHRD
IVETIDRLASGNRLPHLLLYGPPGTGKTSTVLAMARKLYGNKLQNMVLELNASDDRGIDV
VRQQIQDFASTQSISFGGKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKSNRFALICNN
VNKIIPALQSRCTRFRFAPLDAIHVRDRLRHVIESEGLDVPENGMKALVQLSNGDMRKAL
NILQSTHMACQQITEEAVYLCTGNPLPKDIEQISHWLLNEPFTSSSQRISEMKTRKGLAL
VDIVREVTMFVFKIKMPPAVRIQLINDMADIEYRLSMACNDKLQLGSLIAAFTRARGSIV
AATA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtgatagatgtcatggatatcgacgacgacaacggcaatttcaattccgcc
aggcccaacctcaagggcaaaaacgtcgtcgtttcagctgctccaccggacaccagagcc
accccttgggtagagaaatatcgcccccagtctctcgatgacgtcgccgcccaccgcgac
attgttgagaccattgatagattagcatctgggaacagattgccccacctgctgctttat
ggaccaccggggacagggaagacttccaccgttttggcaatggctcggaaactttatgga
aacaagttgcaaaacatggttctggagctgaatgcatccgatgatcgtggtattgatgtt
gttaggcagcagattcaggactttgcaagcacacagagcatctcttttgggggaaaatct
gccgtaaaattggttctactggatgaggcagatgccatgactaaggatgcccagtttgct
cttcgcagagtgatcgaaaaatacaccaaaagcaatagatttgctttgatttgcaacaat
gtcaataaaattattccagcactgcaatcaaggtgtacacggttccgctttgcccccctt
gatgctattcatgtcagggataggctcagacacgtaattgaatctgaagggcttgatgtt
ccagaaaatggtatgaaagctcttgtacagcttagcaacggtgatatgagaaaagccttg
aatattttacagtcaacacatatggcctgtcagcagatcacagaagaagctgtctacttg
tgtactgggaaccctttgcccaaagacatcgagcagatatcccattggctcctgaatgag
cccttcacatctagcagccaaagaatatctgagatgaagaccagaaaagggttggctctg
gttgatatcgtgagagaagttaccatgtttgtttttaagatcaagatgccaccagctgtc
cgcattcaacttattaacgatatggctgatatcgaatataggttgagcatggcatgcaat
gacaagctgcagctggggtcattaattgctgcttttacacgagccagaggttcgatagtt
gctgctacagcataa
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integrated database retrieval system
