Salvia splendens (scarlet sage): 121778196
Help
Entry
121778196 CDS
T07627
Name
(RefSeq) peroxisome biogenesis protein 1-like isoform X1
KO
K13338
peroxin-1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121778196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121778196
Membrane trafficking [BR:
sspl04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121778196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
IstB_IS21
AAA_22
NACHT
AAA_5
NPHP3_N
Bac_DnaA
RNA_helicase
AAA_14
AAA_2
Mg_chelatase
nSTAND3
RuvB_N
AAA_18
AAA_7
ATPase
AAA_lid_PRS2_C
PEX-2N
DUF1539
Motif
Other DBs
NCBI-GeneID:
121778196
NCBI-ProteinID:
XP_042031435
LinkDB
All DBs
Position
19:complement(2799433..2808385)
Genome browser
AA seq
1129 aa
AA seq
DB search
MEFEVRAVGGIESCFVSLPLSLIQTLQTGYLPPILALELRSDDRLWQVAWCGAASNSPSS
IEIARHYADCIGLSDRTSVKVRVISNLPKATLVTVEPLTEDDWEILELNSELAESVILKQ
VGVVHEQMKFPLWLHGQTVVTFLVMSIFPQNPVVQLVPGTEVAVAPKRRKSPSLQSPDEG
HTIAKAQLRIQDSDNKSVYKYEENGVEMDVVLTFGVYVHPETAKKYSFSSCQLVEISPRS
LSKNNKKKLQSRSKSNENEANNGIHNDKRNSPQHLIVHLLLCESVSKGHIMLAQSLRLYL
GVELHSWVHVKGCITSAKKDIPPFSISPYHFKIFEKNQFMENNSPEVASNREHHKQKDSL
DSISSNAELGVSDWSMHDKVVAALSSGLSHDEVEATATKTRERHRKLGHRNGLSDLLRVR
CIAQLETFASNSAEDVSSLVIGSKNLLHLKVKYESLPINCKIQTSGKSFPRNRNQAEDAW
VDILYMLSLVDESLHDGVYNTYELAFDKDCGSNFSSKTLDMLLEKLQLGDMLFSHVAPSV
FPGNVLCASSSSLDWMGTAPSDVNHRLISLLSPTSGMLFSIYNLPLPGHILICGPAGSGK
TLLAKASAKYIEGCKDILAHVVFVSCSRLTLEKPSTIRQELSSNISEALVHAPSVIILDD
LDSLVASSSDLEGSQPSSSSAAFIEFLADILDEGKQRSFCGTGPIAFIATVQSLTNFPQS
LSCSGRFDFHINLPAPAAAERSAILKHEMEKRSLQCSDDLLSDIASKCDGYDAYDLEILV
DRSVHAAIGRSLSANLGSKDNRKPTLIWDDFQQAMENFLPVAMRDITKPAKEGGRSGWED
VGGLNDIRNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR
FISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV
NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRILFCDFPSHQERLEILKVLS
RKLPMDGDVDLDHVAQITEGFSGADLQALLSDTQLEAVHELLDNNDVSTTKKMPVITNAL
LKSIASNAKPSVSEAEKRRLYDIYSEFLDSKRSTAAQSREAKGKRATLA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgaggtgagagcagtgggaggaatcgagagctgcttcgtctctctccctctc
tccctcatccaaacccttcagaccggttacctccctccaattctagcgctcgagctccgc
tccgacgatcgcctctggcaagtcgcgtggtgcggcgccgcatcgaattccccttcctca
attgagatagctcgtcactatgcggattgcattggattgagcgatcggacctcggttaaa
gtgcgtgtgatcagtaatttgcctaaagctacgcttgtgacggttgagccgctcacggag
gatgattgggagattctggagctcaattcggagcttgctgaaagtgttattttgaagcag
gttggagttgtacacgaacaaatgaaatttccattgtggttgcatggacaaacagttgtc
acatttcttgttatgtcaatctttccccagaatccagtagttcaacttgttcctggaact
gaagttgcagtagctccgaagagacgtaaaagtccgtccctgcaatctccagatgagggt
cacacaattgctaaagcacaacttcggatccaagattcagataataagtcagtttataaa
tatgaggaaaatggtgttgaaatggacgtagtactcacatttggtgtttatgtccatcca
gaaacagctaagaaatattctttcagttcttgtcagcttgtagagatatctccacggtct
ctatccaaaaataacaagaaaaagctgcaatctagaagcaaatcaaatgaaaatgaagcc
aataatgggattcataacgataagcggaattccccccagcatctcatcgtccatctatta
ttatgtgaatcagtgtcaaaagggcacataatgctagctcagtctcttcgcctgtatttg
ggggtagaattacactcatgggtacatgttaaagggtgtatcactagtgcaaaaaaagac
atacctcccttttctatttcaccatatcatttcaagatatttgaaaagaatcagtttatg
gagaataacagcccagaagttgcaagcaaccgcgagcaccataaacaaaaagatagtctt
gatagtattagttcaaatgcagaactgggtgttagtgattggtctatgcacgacaaggtt
gttgccgcactttcttctggactttctcatgatgaggttgaagccacagctactaagact
agggaaagacacaggaaacttggtcatagaaatggtttatcagatcttttacgtgtgagg
tgtatagcccagcttgaaacttttgcttcaaattcagcagaagacgtaagctcattggtt
ataggaagcaaaaacttacttcatttaaaagtcaaatatgagagtttgcctataaattgc
aagatacaaacatctggtaaaagtttccccagaaacagaaaccaggctgaagatgcatgg
gttgatatcctttatatgctgtcacttgttgatgaatctttgcatgatggagtctataat
acctatgaacttgcatttgacaaagactgcgggagcaacttttcttcaaaaactttagac
atgttgctagagaagctgcagctgggtgatatgttattctctcatgttgccccttcagta
tttcctggaaatgtcctttgtgcttcaagttcttcattggactggatgggtacagctcca
tctgatgtaaatcacaggttgatctctttgttatctcctacttctggaatgttgttcagt
atctataatctgccgttgcctgggcatattctaatatgcggacctgcaggttctggaaaa
acattattggctaaagcctctgcaaaatatattgaaggctgtaaagatattttggcacat
gtagtctttgtttcttgttctaggctcactctggagaagccttcaactattcgtcaagaa
ctttctagcaacatctctgaagcactggttcatgcaccttctgtcatcatcttggatgat
cttgacagccttgttgcatcttcctcggatctggaggggtctcaaccttcatcatcttct
gcagcattcattgagtttcttgctgatatattagatgagggaaagcaaaggagcttttgt
gggactggtcccattgcattcattgctactgtgcaatccctgactaattttccacagagc
ttgagctgttctggacggtttgactttcatatcaatcttcctgcacctgcagctgctgaa
cggtcagctatattgaagcatgagatggagaaacgatcattgcaatgttctgatgatctc
ctgtcagatatagcatcaaaatgtgatggatatgatgcttatgatctggaaatactggta
gaccgatccgtgcatgcagccattggtcgctcattatctgctaatttgggatctaaagat
aatagaaagcctactttgatttgggatgactttcagcaagcaatggaaaattttctaccg
gtggccatgcgagacatcactaaaccagctaaagaaggtggtcgctctggttgggaagat
gttggtggtcttaatgacattcgaaatgctattaaagagatgattgagctaccttcaaaa
tttcccaacatatttgcacaagcaccattaagattgcgatccaatgttctcttatatggt
cctcctggttgtgggaaaacacatattgttggtgcagctgctgcagcatgttcactaagg
ttcatctcagtgaaagggcctgaattgcttaacaagtatattggtgcttctgaacaagct
gttcgggatatcttctcaaaagcagctgcagcagctccctgccttctcttttttgatgaa
tttgattctatcgctccgaagagaggacatgataataccggtgtaactgatagagttgtc
aatcagtttctaacagaattggatggtgttgaagtcttgactggtgtatttgtttttgct
gctactagtcgaccagatttgcttgatgctgcacttctacggcctggtaggctggaccga
attttattttgtgattttccatcacaccaggagaggttggagattcttaaggtcctctca
agaaagttaccaatggacggtgatgtcgacttggatcacgtagctcaaattactgaaggc
ttcagtggagctgatcttcaagcccttctctctgacacacagcttgaagcagttcacgag
cttttagataacaacgatgtcagcacaactaaaaagatgcctgtaatcacgaatgctctc
ttgaagtccatcgcatccaatgctaaaccgtcggtatcagaagctgagaagcgaaggttg
tatgatatctacagcgagtttcttgattcaaagcgatcaaccgctgcacagtcgagggaa
gcaaaaggtaaacgtgcgacgttagcttga
DBGET
integrated database retrieval system
