Salvia splendens (scarlet sage): 121778291
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Entry
121778291 CDS
T07627
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121778291
03410 Base excision repair
121778291
03420 Nucleotide excision repair
121778291
03430 Mismatch repair
121778291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121778291
03036 Chromosome and associated proteins [BR:
sspl03036
]
121778291
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121778291
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121778291
DNA Replication Termination Factors
ELG1-RFC complex
121778291
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121778291
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121778291
Check point factors
HRAD17(Rad24)-RFC complex
121778291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_5
AAA_14
AAA_11
AAA_assoc_2
AAA_24
AAA_2
Mg_chelatase
SLFN-g3_helicase
AAA_16
DUF3853
nSTAND3
RuvB_N
AAA_28
PhoH
AAA_30
AAA_19
RNA_helicase
AAA_18
AAA_25
DNAX_ATPase_lid
Parvo_NS1
AAA_17
Cdc6_lid
ResIII
TIP49
AAA_7
Motif
Other DBs
NCBI-GeneID:
121778291
NCBI-ProteinID:
XP_042031548
LinkDB
All DBs
Position
19:complement(2525681..2529133)
Genome browser
AA seq
297 aa
AA seq
DB search
MLFYGPPGTGKTTTALAIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS
ARQGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASR
CAKFRFKPLAEEIMTSRILYICNEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFG
SSISSKDLISVSGVIPDGVVQALFTACKSGDLDIADKEVKNVIAEGYPASQMLNHLFDVV
VESDDIPDDQKARICKKFGEADKCLVDGADEYLQLLDVASNIMRALNNMPREFPFGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctattctatgggcctcctggtactgggaaaacgactaccgctctcgccattgctcat
cagctttacgggcctgagttatacaagtctagagtactggagctgaatgctagtgatgat
cgtgggataaacgttgttcgtacgaaaattaagaattttgctgctgttgctgttggctct
gcacgccaaggtggttatccttgcccaccttacaagattataattcttgatgaggcagat
tcgatgactgaagatgcccagaatgccttgcgacgcactatggagacatactcaaaagtt
acaagattcttcttcatttgtaactacattagcagaattatcgaaccccttgcatctagg
tgtgcgaagtttagattcaaaccacttgcagaagaaattatgacatctcgcattctttat
atctgcaatgaggaaggtcttaacttggattcagaggcactttcaaccttaagttctatc
tctcaaggtgatctgcgtcgtgctataacatatctacaaggtgctgctcgcttattcgga
tcctcaatttcatctaaggacttaatcagcgtgtctggtgtcatccccgatggagttgtg
caggctctctttacagcttgcaaaagtggtgatttagacatagctgataaagaagtaaaa
aatgtgatcgctgaaggttatccagcttctcagatgctcaatcatttgtttgatgtagtt
gtcgaatcagatgacataccagatgaccagaaggcaagaatatgcaagaaatttggagag
gcagataagtgtcttgtagacggagcagacgagtatttgcaactgttggatgtggctagc
aatatcatgcgtgcgctaaataacatgccacgggaattccctttcggaagttag
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