Salvia splendens (scarlet sage): 121778631
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Entry
121778631 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121778631
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121778631
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
121778631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_4
Prok-RING_4
PHD
zf_RING_Vps8_fungal
SLX1_C
Rad50_zn_hook
DUF5560
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
121778631
NCBI-ProteinID:
XP_042031949
LinkDB
All DBs
Position
19:21301934..21303398
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AA seq
410 aa
AA seq
DB search
MVHLRQLIAVLSLVICVEAQNTTNERDISDVNPLRPSMPVVLVVLSIMFCLTFLILAYAK
FCHRIRSEPSDLIQGPNGAVGSRARFSGVDKTIIESLPFFRFSSLRGSKEGLECAVCLSR
FEDTELLRLLPKCRHAFHMSCIDIWLENHSSCPLCRNKFDAGDIKSLRYSSSFRCPSSSR
EEPNLEFFIQREQSQGRSMRFNLAHTLQKLARGRRDDPLIQEFKNQSDGTQNLHNVKHRI
IVSDVIHKSRWSDVNSSDLMSLSSEMLSVMEGKGLSMSGRFNNEDAAKEHISKIKEDMER
KRLFESKIVTRAEITSSGETSGYPNIDLDSAVMSNSLDPSQKRSMSEITNVSRFTELNSS
SNRISGFSTSVNSERDDKVRRLWLPIARRTIQWFSGQEMSSDARQPTVDV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggttcatctgagacagctgattgctgtcctgtccttggtgatatgtgtggaagctcaa
aacacaaccaacgagcgcgatataagcgacgtaaatccactccgtccgagcatgccagtt
gtgctagtagtcctatccatcatgttctgcctcactttcctcattctggcatatgccaag
ttctgccacagaatcagatccgagccgtctgatctgatacagggccctaacggggcggtt
ggatcaagagcccggttctcaggtgtagacaaaaccatcatagagtcactcccattcttc
aggttctcctcactcagaggctcgaaagaaggcttagaatgtgccgtgtgcctctcaaga
tttgaagacacggagctccttcgtctcctgcctaaatgccggcacgccttccacatgagc
tgcatcgacatatggctggagaatcactccagctgccccctctgcaggaacaagttcgat
gcaggagacatcaagagcttgagatacagcagcagcttcagatgcccgagcagctcgagg
gaggagcctaatcttgagttcttcatacaaagagagcaaagtcaagggaggtcaatgagg
ttcaaccttgcccacacactacagaagttagctagagggaggagagacgatccattgatt
caagaattcaagaatcagagcgatggaacgcagaatctgcacaatgtcaagcataggatc
attgtatcagatgtcatacacaagagcaggtggagcgatgtcaactcctcggacctgatg
tctctcagctccgagatgctgagtgtcatggagggaaaagggctgtccatgagtgggaga
ttcaacaacgaggatgcagccaaagagcatatctcgaagatcaaggaggatatggagagg
aagaggctgtttgagtccaagattgttacaagagctgaaattactagctctggtgaaacc
tctggatatcccaatattgatttggactctgccgtgatgtctaactcattggatccgtcc
cagaaaagatcgatgtctgaaatcacaaacgtgtcgaggttcacagaattgaactcaagt
agcaacagaatcagtggattctcaacttcagtgaattcagaaagagatgacaaagttaga
aggctttggttgcctattgctaggagaaccattcagtggttttccggtcaagaaatgagc
tcggatgccagacaacctacggtggatgtctga
DBGET
integrated database retrieval system
