Salvia splendens (scarlet sage): 121778972
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Entry
121778972 CDS
T07627
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Module
sspl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121778972
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
121778972
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
121778972
NCBI-ProteinID:
XP_042032275
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Position
19:complement(8173093..8175203)
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AA seq
389 aa
AA seq
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MPKLSHTIVLALIATLHTCNAAFYNVVNFGAKGDGVTDSSSAFLKAWAAACSSVEQSTIY
VPKGTFLVNSIVFSGACKSKMQLRIYGALVAPYDYKSFLSDQAWITFEYVNGVSVVGGDI
DARGSSYWACKKSGANCPFGARSFSFQTCNDVEINGLTSHNSHAVHVFINGCNNMRIQDL
TIVAPGDSPNTDGIHIGNSNNISVRHANIATGDDCISIGPGTSQMYMDNIVCGPGHGISI
GSMGGNPGEGGVEHIVVNNSIFTRTENGVRIKTWAKPFNGYARDIMFENLQMQNVSNPII
IDQEYCPERNCPNGNSGVKLSDVSFYNITGTSWTQDALVLICSWTKPCERIYLQDIHLNY
INALPIKQHAASHCENAGVISNGVVIPNC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaattgtctcacacaattgttcttgcactgattgcaacattgcatacgtgcaat
gcggcattctataacgtggtaaactttggagcgaagggcgatggggtgacggactcgtca
tcggccttcctcaaggcttgggcggccgcctgcagctcggttgagcaatccaccatctac
gtccccaaggggacgttcttggtgaactcgatagtgtttagcggagcttgcaagagtaaa
atgcagctccgaatatatggagctcttgtagctccatatgattacaagtctttcctctct
gatcaagcttggataacattcgaatatgtaaatggagtatcagttgttggcggcgatatt
gatgcaagaggctcaagttattgggcatgtaaaaaaagtggagccaattgcccctttgga
gcaaggtcgttctcgttccaaacttgcaacgatgtggaaatcaatggtttgacatcgcat
aacagccacgcagtccatgtttttattaatggatgcaacaacatgagaattcaagatttg
acaattgtggctcccggtgatagccccaacactgacggcatccacatcgggaattcgaat
aatattagtgtcaggcatgctaatattgccaccggcgacgactgtatctccattggcccc
ggcaccagccaaatgtacatggacaacattgtttgcggccctggccatggcattagcatt
ggaagtatgggaggcaatccaggcgaaggcggagtggaacacattgtcgtaaacaactct
atcttcacaagaacagaaaacggagttcggattaaaacatgggctaaaccattcaatgga
tacgcaagagacatcatgtttgaaaatttgcaaatgcaaaatgtttccaaccctataatc
attgatcaagagtattgcccagagaggaattgtccaaatgggaactccggggtgaaactg
agcgacgtttcgttctacaacatcacaggcacatcgtggactcaagatgcgttggtgttg
atttgcagttggacgaagccgtgtgaacgtatatatctgcaagatattcatctaaattac
atcaatgcattgcctatcaaacagcatgcagcttcacattgtgaaaatgcaggagtcatt
tcgaatggtgttgtaattccaaattgctaa
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