Salvia splendens (scarlet sage): 121779316
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Entry
121779316 CDS
T07627
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121779316
03083 Polycomb repressive complex
121779316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121779316
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121779316
Histone modification proteins
HAT complexes
HATB complex
121779316
HDAC complexes
Sin3A-HDAC complex
121779316
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121779316
PRC2.2
121779316
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121779316
Heterochromatin formation proteins
Other heterochromatin formation proteins
121779316
Chromatin remodeling factors
NuRD complex
121779316
NuRF complex
121779316
NuRF complex (fruit fly)
121779316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_HPS5
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
121779316
NCBI-ProteinID:
XP_042032565
LinkDB
All DBs
Position
19:4771275..4780443
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AA seq
460 aa
AA seq
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MKERAAERTVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQIEQATYKNRQRLYLS
EQTDGSVPNTLVIANVEVVKARVAAAEHISQFNEESRSPFVKKSKTIIHPGEVNRIRELP
QNSNIVATHTDSPDVLIWDVESQPNRQPVLGATPSRPDLILTGHQDNAEFALAMCPTEPF
VLSGGKDKSVVLWSIHDHISSLAADQGAHKSPGSKGNLSNGKAGDGTAVEARGIFQGHGD
TVEDVQFNPSSAQEFCSVGDDSCLILWDARTGSSPVVKVEKAHNADLHCVDWNPNDVNLI
LTGSADNTVHMYDRRNLTSGGVGAPVHIFEGHSAAVLCVQWSPAKASVFGSAAEDGILNI
WDHAKIGKAGNDVGSGDSSYPPGLFFKHAGHRDKVVDFHWNAADPWTIVSVSEDGEKTGG
GGTLQIWRMIDLIYRPEEEVIAELDKFKSHLLTCSTSSSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagcggctgagcgcacggtagaggagcgctacacgcagtggaagtcgctc
gtaccagttctctacgattggttggccaatcacaatctcgtttggccgtccctctcatgc
cgttggggacctcaaatagagcaagcaacatacaagaatcgtcaaaggctatatctttcg
gaacagacagatggcagcgttccaaacacgctagtcatagcaaatgttgaagttgtaaaa
gctagggttgctgctgcagagcacatatcacagtttaatgaagaatcacgatcacctttt
gtgaagaagagcaagaccatcattcatcctggcgaggtgaatcgaatcagggaactgcca
cagaatagcaatattgtggcaactcacaccgatagtcccgatgttctcatttgggatgtc
gaaagtcagcctaatcgtcaacccgttttaggtgccacaccatcacgccctgatttgata
ctgactggacatcaagataatgctgaatttgctctagccatgtgtcctacagaaccattt
gtgctctctggaggcaaggacaagtccgtggtgttgtggagcatccacgaccatatatct
tctttggctgcagatcagggggctcataaatctccaggttctaagggtaatttatctaat
ggcaaagctggtgatggaacagctgttgaagcacgtggcatatttcaggggcatggggac
actgtcgaagatgtccaatttaacccatcaagtgcacaggagttctgcagtgttggtgat
gattcttgcctgattctgtgggatgcaagaactggctcttctcctgttgtcaaggttgaa
aaagcccacaatgccgaccttcactgtgttgattggaatcccaatgacgtgaatctgatt
ttgacagggtctgctgataatactgttcacatgtatgatcgccgaaatcttacgtctggg
ggagtcggagcccctgttcatatttttgaaggccattctgctgcggtgctttgtgtccag
tggtctccggctaaagcatctgtcttcggcagtgctgcagaggatggcatcttaaatata
tgggatcatgcaaagatcggaaaggcaggaaatgatgttggatcaggagattcaagctat
ccccctggcttattttttaaacatgctggtcacagggacaaggtggttgattttcactgg
aatgcagcagatccgtggactattgttagcgtgtctgaggatggagaaaagactggtggg
ggaggcacactgcagatttggcggatgattgacctaatttatcgaccagaagaggaggtg
atagctgagctggataagttcaaatctcatcttttgacgtgctccacttcatccagttcc
tga
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