Salvia splendens (scarlet sage): 121779640
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Entry
121779640 CDS
T07627
Name
(RefSeq) probable pectate lyase 13 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121779640
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121779640
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
121779640
NCBI-ProteinID:
XP_042032931
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Position
19:complement(23925631..23929253)
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AA seq
495 aa
AA seq
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MLLPRTYIPLLLLLLQCLICSSYVEAVTSFNLTLSHQHPNPGFVALQVRRSVNESISRRR
QILETPLSSKAQSQCLTGNPIDDCWRCDSNWGNNRQRLADCAIGFGQGAMGGKGGRFYEV
TDSSDHDTVSPTPGTLRYAVIQDEPLWITFKYNMVIKLKHELIVNNYKSIDGRGANVQIT
GNGCITLQYVSNVIIHNVHIYNCKPSGNTDIRSSPTHVGHRGKSDGDGISIFGSRNIWID
HCTLSQCTDGLVDIIMGSTAITVSNNYFSDHNEVMLLGHDDKYLPDSGMQVTIALNRFGP
GLVQRMPRIRRGYVHVVNNDYFQWKMYAIGGSASPTVNSEDNRFTAPADPSAKEVTRHED
TSEGGWADWNWRTDGDLMVNGAFFVSSGEGATMQYAKASSFNPKSASQIEQLTMNAGVLG
GTRDNSVSSYGGGSTTVTGGGSGGGGSSGGGGDYFGMIFAGSAAVRGSSPPTILFLSSLI
ILILYISSSIVNGLV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcctcgcacctacattcccttgctgctgctgctgctgcaatgtctcatttgc
tcttcctatgttgaagctgtcacttccttcaatctcaccctctctcatcagcaccccaac
cctggttttgtagctctacaagtcagaaggagtgtgaatgaatccatatccagacgccgt
cagattcttgaaacccccttgagtagtaaggcacagtcacaatgcctgaccgggaacccc
atagacgactgctggcgatgtgactccaattggggaaacaaccggcagcgcctggctgac
tgcgctattggcttcggccagggtgcgatggggggcaaagggggccgtttctatgaggtg
acggactcctctgatcacgacacagtcagtccgacccctggcacccttcgctatgctgtc
atccaagacgagcccctctggatcaccttcaagtataacatggtcatcaagctcaagcac
gagctgattgtcaacaactacaagtccatagatgggcgtggtgccaatgtgcagatcacg
gggaacggatgcatcacgttgcagtatgtgagcaatgtcatcatccacaatgtgcacatt
tacaactgtaaaccgtctgggaacactgatattaggtcgagccccacgcatgttggccac
agggggaagtcggatggtgatggcatatccatctttggttcgaggaacatatggattgat
cattgcacgctgtcacaatgcaccgatggattggtggatatcatcatgggatctacagct
attacggtgtcgaataactatttctctgatcataatgaggttatgctgctcgggcatgat
gacaagtacttgcccgactcgggaatgcaggtcacaatagccttgaacaggttcggaccg
ggacttgtgcagaggatgccaagaataagaaggggctacgtccatgtggtgaacaacgac
tattttcagtggaaaatgtacgcgattggagggagtgctagcccgactgtgaatagtgaa
gataaccgcttcactgcaccagctgatccaagtgcgaaagaggtgacaagacatgaggat
acgagtgagggggggtgggcagactggaattggaggacggatggggacttgatggtgaac
ggtgcattctttgtgtcatccggtgaaggggctacgatgcagtatgccaaggcctcgagt
ttcaaccctaaatcggctagccaaatcgaacaactaaccatgaatgccggtgttcttggt
ggcacaagggacaatagcgtcagctcatatggtggcggatccaccaccgtgacaggcggc
gggagcggcggcggagggtccagcggtggtggaggtgactattttgggatgatatttgcg
ggcagcgccgccgtaagagggtcatcgccgcccaccattttgtttttatcttccctaatt
attttaatattatatatttcctcctccattgttaatggtttggtatga
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