Salvia splendens (scarlet sage): 121779716
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Entry
121779716 CDS
T07627
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121779716
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121779716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
Sipho_Gp157
AAA_21
Nuf2_DHR10-like
Phage_TAC_3
DASH_Duo1
pAdhesive_17
Exonuc_VII_L
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
121779716
NCBI-ProteinID:
XP_042033040
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Position
19:complement(9730449..9767291)
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AA seq
625 aa
AA seq
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MEPSPLFTDDPARRPKRLEAGIISRIHLENFMCHSNLDIEFGDLVNFITGQNGSGKSAIL
TALCVAFGCRARGTQRANTLKDFIKTGCSSALVQVEIKNQGEDAFKHELYGDTITVERRI
SESAGGSITLKNSQGRKIGSKRDDLREIVEYFNIDVENPCTTMTQDKSREFLHSGNDKDK
FKFYFKATLLQQVDDLLSGIDKQLQDANGLISHLEDSLRPAKKELDELQEKIKNMEIMEE
MSQQVQLLRKKLAWSWVYDADRKLDVQHTLIEKLKGRIPSCQAMIDQNHHKMEKLNDRLA
AKKDEISNMMERTSEVRRLKEDLQQNLSMAVKEQLELTGEQERINRQIDNMVKQVRSLER
QIQEMHEQYQQNTQAEENEMEERLRELQAEVDKANVNTQRLKMSIKAIVIFPHGYGKSKC
IKGIRLTERLKREGQRFPESIDDLRMLHEKKERKISRKLRTYKAFKEKLEACEKALNVRW
GKFQRNATLLKRQLTWQFNGHLKKKGISGQIKVSYEEQTLSVEVKMPQDASSSTVRDTSG
LSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDAIVDFALAQGSQWIF
ITPHVISMVKNDERIKKQQMGAPRG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagccctctcctctcttcactgacgaccccgctcgccggccgaaacgcctggaagcc
ggtataatctctaggatccatctcgagaacttcatgtgtcacagcaatctcgacattgag
ttcggagacttggttaacttcatcaccggtcaaaatgggagtggaaagagcgcaatatta
acggcactttgtgtcgcattcggctgccgagctcgtggtacgcagcgagcgaatacacta
aaggattttatcaaaactggctgcagctctgcgcttgtccaagttgagataaagaatcaa
ggtgaagatgctttcaagcatgaactgtatggagacaccatcaccgtggagcgtagaatc
tcagaatctgctggtggcagcatcacattaaaaaacagtcaaggtagaaaaattggctcc
aagagagatgatctccgtgagattgtagaatacttcaatattgatgtagagaatccatgc
acaaccatgacacaagacaagagtagagaatttctgcattcaggcaatgacaaagacaag
ttcaagttctacttcaaggcaacacttcttcaacaagtggatgacctactaagcggtatt
gacaagcagctacaagatgcaaatggcctaattagtcatttggaagattccttaaggccg
gcaaagaaggaacttgatgaattacaagaaaagataaaaaacatggaaattatggaggag
atgtcacaacaggtgcagctattaagaaagaaactagcttggtcgtgggtatatgatgct
gatagaaaacttgatgtgcaacatacgttgattgaaaagctaaaaggaaggatacctagc
tgtcaagcaatgattgaccagaatcatcacaagatggaaaaattgaatgatcgattggca
gcaaagaaagatgaaatatcaaatatgatggaaagaacatctgaagttagaagattgaag
gaggatctacagcaaaatctttctatggctgtgaaggagcagcttgagctaacaggggaa
caagagcgcataaataggcaaattgataatatggttaaacaggtcagatcactcgagagg
cagatccaggaaatgcatgagcagtatcagcaaaatacacaggctgaagaaaatgagatg
gaggaaaggcttagggaacttcaagctgaagttgataaagctaatgtcaacactcagaga
ttgaagatgtcgataaaagcaatcgtgatatttcctcacggatacgggaaatccaaatgc
atcaaaggaataaggttgactgaaagacttaagcgtgagggccaaagatttccagaatca
attgatgatctcagaatgttacatgagaaaaaagagcgtaaaatatcaagaaaactgcgt
acttacaaagccttcaaggaaaagttggaagcatgtgaaaaggcactaaacgtgagatgg
ggcaaattccagaggaacgctactcttttgaagcgtcagctaacatggcaattcaatggc
catttgaaaaagaaagggatcagtggtcagatcaaagttagttatgaagagcagactctc
tcagtagaggtaaagatgccgcaagatgcatcaagcagcactgttcgtgacactagtgga
ctttcaggtggtgagagatccttttcaacattatgttttgcccttgcacttcatgagatg
acagaagcaccttttcgggcaatggatgaatttgatgtatttatggatgcagttagcaga
aaaatcagcttggatgctatagtggattttgctttggcccaaggttctcaatggatattt
ataaccccacatgtcatcagtatggttaaaaatgatgaaaggatcaagaagcaacaaatg
ggtgctcctcgagggtga
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