Salvia splendens (scarlet sage): 121779841
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Entry
121779841 CDS
T07627
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121779841
03036 Chromosome and associated proteins [BR:
sspl03036
]
121779841
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121779841
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121779841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Secretin_N_2
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
121779841
NCBI-ProteinID:
XP_042033225
LinkDB
All DBs
Position
19:17959911..17973497
Genome browser
AA seq
1363 aa
AA seq
DB search
MVDGGEIEKKDEETIDAEEEFSDNSAEYNNDEGEEELEGESHSEEPLTEEDVEELIAELI
EVESKAAEAQEALEEESLINVEADVRKELAQSLSDDELDKAVSGEMAAFREQWEVELDEL
ETESAHLLEQLDGAGIDLSSLYKWIERQAPNGCCTIAWKNRTHWAGTNLSSDALESVTKA
EEFLQVHRPVRRRHGKVLEEGASGFLGKRVEKSESSETANDTTTVDWDSFSRMCSDKSSL
ENVNFGSEHWASVYLASTPQQAAELGLKFPGVDEVEEIDDVDGTLSDPFIADALANEGDL
NLTEEQKKNFRKVKEEDDANADRKLHVHFKRRRHRKQSKEDSAQGELSPSDGMRERQLDG
SMGKEDVTAEKDVGDQEVNDSVNELFGIVHGERAKNNLDASSSVDVVELKGIKRSRECDE
LPDSKKFCTITLDSDGEGPDAECKPLNMEEATKLDSQVISSSESDSDSDSDSDSDDSDAG
RSINTSTKRRRKKIIRRIIDDAELGEETKKKIAIEKERQERLKSLEARFSTKSPVSSVNN
MSSFDGTGLEILGDISSGYVVNVVREEGEEAVRIPPSISTKLKIHQVAGIRFMWENIIQS
VTKVRSGDKGLGCILAHTMGLGKTIQVIAFLYTAMRSVDLGLRTALIVTPVSVLHNWRHE
FMKWRPSELKPLRIFMVEDVPRERRVELFAKWRIKGGVFLIGYTAFRNMSLGKYAKDRDM
AREISNALQEGPDILVCDEAHIIKNTRADTTQALKQVRCQRRIALTGSPLQNNLMEYYCM
VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTAEDVKIMNQRSHILYEQLKGFVQRMDMN
VVKKDLPPKTVFVISVKLSPLQRKMYKRFLDVHGFTKDKISGEKIIKRSFFAGYQALAQI
WNHPGILQLRKENKDSAKCEDVENLADDCSSDENIDYNILPGEKLGNPQRKNYNGFLRED
WWRDLLKENSYKEPDQGGKMVLLLDILTMCSSIGDKALVFSQSILTLDLIEFYLSKMLRP
RKNGKCWKKGKDWYRLDGRTESSERQKLVERFNDPSNRRVKCTLISTRAGSLGINLHSAN
RVIIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHATMEEKIYKRQVTKEGLAARVV
DRQQVHRTMSKEEILHLFDFGDDDITPELGQEIGVATELNTTIRVGNLPKQKLPLPHGGS
SSDRIIESLISDHHPSWITNYHEHETLLQENEDEKLSKEEQDLAWEVYQKTLEWEEIRRV
SPEENIPTEQQRNSVQEPAQHQQQQPFAEPPVDPPPAPAPKCDYALERARRRHQYRYGHR
QCTNLAHLLTLRSQQIKAGGHAICGECARVLRWEDVQPDPRCW
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggttgatggaggagagattgagaagaaggatgaagaaacaattgacgctgaggaagaa
ttttccgacaattcggctgaatataataacgatgaaggtgaagaggagctggaaggagaa
tctcattctgaggaacccttgaccgaggaggatgtagaggagctaattgctgagcttata
gaagttgagagtaaggctgcggaagcccaggaggcactggaagaggaatccttaatcaat
gttgaggctgatgttaggaaagaattggctcaatctctctccgatgatgagttggacaag
gctgtgtccggagaaatggcagccttcagggaacaatgggaagtggagcttgacgagctt
gagacagaaagtgctcatttattggagcaacttgatggtgctggtattgatctttccagt
ctctataagtggatcgaaagacaagctccgaatggttgctgcaccatagcatggaaaaat
aggactcactgggctggaactaatttgtccagtgatgctcttgaatcagttacaaaggct
gaagagtttctccaggtccacaggccagttagaagacggcacggcaaagtcttggaggag
ggtgccagtggtttccttggaaagagagttgagaaaagtgaaagcagtgaaactgcaaat
gatactacaactgtagattgggattctttcagtagaatgtgctctgacaagtcttctttg
gaaaatgtaaattttggcagtgagcactgggcttcggtttatctggcaagcaccccacaa
caggctgcagaactgggtctgaaatttccaggtgttgatgaggtggaagagattgatgat
gttgatggtacattgtctgatccatttattgctgatgctttagcaaatgaaggagatttg
aatcttactgaagaacaaaagaaaaactttagaaaggttaaagaggaagacgatgcaaat
gccgatcgcaagcttcatgttcattttaaaagaaggaggcatagaaagcaaagcaaagag
gattctgctcaaggagaactttctccatctgatgggatgagggagcgtcaattagatggt
tcgatgggtaaggaggatgtaactgctgaaaaagatgttggagatcaagaagtaaatgat
agtgtgaacgagttgtttggcattgttcatggagagagggcaaagaataatcttgatgcc
tcttcttcggtggatgtggttgagttgaagggcatcaaacgttcaagagaatgtgatgaa
ctaccagatagtaagaaattttgtacaattactttggatagtgatggtgagggtccagat
gctgagtgtaaaccattgaatatggaggaagccaccaaattagatagccaagttatctct
agttcagaatctgattcagattcagattcagattcagattcagacgattcagatgctggc
agaagcataaatactagcactaaaagaagacgtaagaagataattaggaggatcattgat
gatgctgaattgggcgaagaaactaagaagaaaattgcaattgagaaggagcgtcaagag
cggcttaaatcattggaggcgcggttttctaccaaatctccagtctcttcagtcaataac
atgagctcgtttgatggcactggtttagaaatactgggcgacatatcttctggttacgta
gtaaatgtggtcagagaggaaggcgaagaggcagttagaattcctccaagcatctcaacg
aaattaaagatccaccaggttgcaggaatccggtttatgtgggaaaatattattcagtct
gtgacaaaagtgaggtctggtgataaaggccttggttgcattctggcgcatactatgggg
ttaggtaaaacaattcaggtcatagcatttctgtatactgctatgagaagtgtggaccta
ggcctgagaactgcactcatagtaacaccagtgagtgttttacacaattggcggcatgag
tttatgaaatggagaccatctgagctaaaacctctacggatcttcatggttgaagatgtt
ccaagggaaagaagggtcgagttgtttgctaaatggagaattaaaggcggtgtcttcttg
attggttatacggctttccggaatatgtctcttggaaagtatgctaaggaccgggatatg
gctagagagattagtaatgcacttcaggagggacctgacattcttgtctgcgacgaagca
cacattatcaagaacactagggctgatacaacccaggcattgaaacaagtgaggtgccag
aggaggatagcattaactggatcgcctcttcagaacaatcttatggagtactattgtatg
gttgattttgttagagaaggatttcttggcagcagccatgagttcaggaatagattccag
aacccaattgaaaatggtcaacacaccaattctactgcagaagatgtaaagataatgaat
caaaggtctcatattttgtacgaacagttaaaaggatttgttcagagaatggacatgaat
gtggttaaaaaagatttgcctcctaaaactgtattcgtcatctctgtgaaattatctcca
ctccagagaaaaatgtataagaggtttcttgatgttcatggtttcacaaaggacaagatc
tcgggtgaaaagataattaagagatccttttttgcagggtaccaggcattagctcagata
tggaaccatcctggaatattgcaactgaggaaagaaaacaaagattctgctaaatgtgaa
gatgtggaaaatcttgcagatgactgctctagtgatgagaacatcgactacaatatactc
cctggagagaagctggggaatcctcagagaaagaattataatggattccttcgtgaggac
tggtggagggatcttttgaaggaaaatagctataaggagcccgatcaaggcggtaaaatg
gtcttgctgcttgatatcctcacaatgtgttcaagtataggggataaggcactggtgttt
agccagagtatattaactttggacctaatcgagttttatctttccaaaatgcttcgtcca
aggaagaacggaaaatgttggaaaaaggggaaggactggtacagattggatggaagaaca
gaaagctcggagaggcagaaattggttgagaggttcaatgacccgtcaaacagaagagtg
aaatgcacattgatatcgactagagctgggtcactggggattaatcttcattcagccaac
cgagtaattatagttgatggatcttggaacccgacatatgatcttcaggctatatatagg
gcttggaggtatggccagaaaaagcctgttttcgcataccggttgcttgcacacgcaaca
atggaagagaagatttataagcgtcaggtgactaaggaaggacttgcagcaagggtcgtt
gaccgacagcaggtgcacagaacgatgtccaaagaagagatattacatttgtttgacttt
ggtgatgatgacataacacctgagctgggacaagagattggagttgctaccgagctaaat
acaactattcgcgtaggaaacttaccgaagcagaagctgccacttccacacggaggttca
tcttcggacagaataatcgagagcttgataagcgatcatcatccaagctggatcactaat
taccatgagcacgagaccctgctgcaagaaaacgaagacgagaagctgtcgaaagaagag
caggatttggcttgggaggtgtatcagaagactctcgagtgggaggaaattcgaagagtc
tctccagaagagaacatacccactgagcagcagagaaattctgtccaagaacccgcacag
catcagcagcaacagccttttgcagaacctccagttgatcctcccccagcaccagctcct
aaatgtgactatgcactagaacgagccagacgacgccaccaataccgatacggacaccga
cagtgcacaaacctcgcgcacctgctgaccttgaggagtcaacagattaaggcaggcggc
catgccatatgcggcgaatgcgcccgtgtgctgcgttgggaggatgtccagcccgatccg
aggtgttggtga
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