Salvia splendens (scarlet sage): 121779885
Help
Entry
121779885 CDS
T07627
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121779885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sspl01007
]
121779885
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121779885
Enzymes [BR:
sspl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121779885
Amino acid related enzymes [BR:
sspl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121779885
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121779885
Prokaryotic type
121779885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
Flp_N
Motif
Other DBs
NCBI-GeneID:
121779885
NCBI-ProteinID:
XP_042033271
LinkDB
All DBs
Position
19:complement(25762565..25766709)
Genome browser
AA seq
533 aa
AA seq
DB search
MAGKKPELQLYNSMTKEKEVFKPIVEGKVGMYICGVTSYDLSHIGHARAYVAFDVLYRYL
KYLDYDVSYVRNFTDVDDKIIRRANEVGEDPVALSGRFCQEFLNDMADLQCLLPTNQPRV
TDHMEQIKDMIAKIISNGCAYPVDGDVYFSVDSFPNYGRLSGRKLEDNRAGERVAVDTRK
KNPADFALWKTAKPGEPQWDSPWGPGRPGWHIECSAMSAHYLTHAFDIHGGGMDLIFPHH
ENEIAQSCAACSESKVNYWIHNGFVTANDEKMSKSVGNFFTIREVTKLYHPLALRHFLLG
THYRSPVNYSISQIEIASDAVFYIYQTLKDCEDALSAFREDAGLNNPKVRISPAAQECIS
RLHNDFETKLADDLHTPTILNASLQEAFKYINTSVNSMKKKQQKQQQLSIVKSLIDLEIE
IKQVLGTLGLLSSSTYAEVLEQLRDKALRRAELTEEDILQSIEERTLARKNKEFSRSDQI
RSDLAAKGIALMDVGNGTVWRPCVPAQAESAEVDAKNVPPAEKEIEDETSIEA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaagaagccggagctgcaattgtataacagtatgacgaaggagaaggaggta
tttaagccaattgttgagggcaaagttgggatgtatatttgcggcgtcacttcctacgat
ctcagccacatcggccacgcgcgcgcctacgttgcgttcgatgttctctacagatatctc
aaatatttggactatgatgtttcttacgtgcggaatttcactgatgttgatgacaagatt
attcgtcgagcaaatgaggttggtgaagacccagtagcattgagtgggcggttttgccaa
gagtttcttaatgacatggctgatctccagtgccttcttccaaccaaccaaccacgtgtt
actgatcatatggagcaaatcaaggatatgatagctaagattattagcaatggctgtgct
tatcctgttgatggagatgtttacttctctgttgatagtttcccaaattatggtcgttta
tcggggcggaagctagaagataatagagctggagaacgggttgctgtagatacaaggaag
aagaatcctgctgactttgctttgtggaagactgcaaagcctggggagccacaatgggac
agcccctggggtcctggaagaccaggatggcacattgaatgcagtgccatgagtgctcat
tacttgacacacgcatttgatattcatggcggtgggatggatttgatctttcctcatcat
gaaaatgagattgctcagagttgtgcggcttgctcagagagcaaagttaattactggata
cataatggttttgttacagcaaatgatgagaaaatgtcaaaatctgttggaaactttttc
accattcgcgaggttacgaaattgtaccatcctcttgcactaaggcacttcctcttggga
actcactaccgttctccagtcaattattccatatctcagatagaaattgcttcagatgct
gttttctacatatatcagacacttaaagattgtgaagatgcattgtcagcatttagagaa
gatgctggactcaacaatccaaaagttcgtatcagtcctgctgcccaagaatgcataagt
aggctgcataacgattttgagacaaaactagctgatgatctgcacacacccaccattcta
aatgcttccctgcaagaagcattcaaatacatcaatacgagtgtaaactcaatgaagaag
aagcagcagaagcaacagcaattatcaattgttaagtcgcttattgatctagagatagag
atcaagcaagttctcggcactcttggattactttccagttcaacttacgctgaggtattg
gaacaactgagagacaaggctctgagaagggcagagttgaccgaagaggatattctccaa
tcaattgaggaaagaacactagcccggaaaaacaaagagttctctagaagcgatcagatc
aggagcgatcttgcagcaaagggaatcgcattgatggatgtcgggaatggcactgtctgg
aggccctgcgtgccagctcaagcagagagcgcagaggttgatgccaaaaatgtgccgcct
gctgaaaaagaaattgaagatgaaacatcaattgaagcatga
DBGET
integrated database retrieval system
