Salvia splendens (scarlet sage): 121780218
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Entry
121780218 CDS
T07627
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121780218
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121780218
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
FtrD-like
Trm112p
Motif
Other DBs
NCBI-GeneID:
121780218
NCBI-ProteinID:
XP_042033686
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Position
19:22099522..22101812
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AA seq
521 aa
AA seq
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MESSRACERCRKRTLVPDVETGNMVCTSCGIIQQFDNFQEPTGGITGITGTYIRLGTSGT
GTVHDYKETKIYHAQNLIDDFMFKLDFSAQKSQEVRLLIEKVTDGEYGQGDWFSVLIGAC
SYIVMRKDQKMMPIVEVADTVGCDVYELGRMIGRVVEFVDLKLPEFDIVNAFERAMTSIP
SFTHVAADLVKRMLQQGVFLVQCLIKWFVTTGRRPMPVVAAVLVFVAQLNQVDSVKIEDV
AMELHVTISTCRLRYKELLERLVEVAQVLPWGKDVTVKNILRNAPSVMQYMEMKSFSRGG
KQRFSCDVEEIVGDCLSKDIGYGYDTFNMEEDCSSSSKYFEPNCLPSDCPDKFQISHECL
TLIYSNYLEGISGIDVVNPRKRQKGTFDLHGYSEWWSGKSEMSKKMILKDILEKDVGLDV
RPPSFNRACLALAERQEKIKAAKLRIWRIMRPKSGGGNDLITVFEPEKARKKTRKRKCGV
EIEWEDLIIETLLLHNVKEEEIEKGHYNALLDLHVFAHVNE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttctcgcgcttgcgagcgctgcaggaagaggacgctagtccctgatgttgaa
acaggtaatatggtatgcacgtcgtgcggaatcatccaacaattcgataattttcaagaa
cctactggcggcattaccggcattactggcacctacattcgccttggaacctccggcacc
ggcactgtccatgattacaaggaaactaaaatctatcatgctcaaaacttgattgacgat
tttatgttcaagttggatttttcagcccagaaatcgcaagaggttaggcttttgattgag
aaggtcactgatggagaatacggccaaggggattggttttctgttctgattggggcatgt
tcttatattgtgatgagaaaggatcagaagatgatgcccattgttgaagtggctgataca
gttggttgcgatgtgtatgagttagggcggatgattggccgggtggttgaatttgttgat
ttgaagttgcctgagtttgatattgtgaatgcttttgagcgagcaatgacgagcatccct
agttttactcatgtggcggcggatttggttaagaggatgctgcagcaaggggtgtttttg
gtgcagtgtttgatcaagtggtttgttacgacgggaaggagaccaatgccagtggtggct
gcagtcttggtttttgttgcacaattgaatcaagtagatagtgtgaagatcgaagatgtg
gcaatggagttgcacgtgacaataagcacctgcaggctaaggtacaaagagcttctagag
aggcttgtcgaggtcgcacaggtgctgccttgggggaaggatgtgacggtgaagaatatt
ttgaggaacgccccatctgtgatgcaatacatggagatgaaatcattcagtcgaggggga
aaacaacgtttcagctgtgatgtggaagagattgtgggagactgcttgagtaaagacatt
ggatatggatatgataccttcaatatggaagaagattgcagcagcagctctaaatatttt
gagccgaactgtttgcctagtgattgtcctgataaatttcaaatttctcatgagtgtttg
acattgatttattcaaattacttggaggggatttctggcattgatgtagtgaatccaagg
aaaaggcaaaaaggaacgtttgatcttcacggatattcagagtggtggagtgggaaatcg
gagatgagcaagaaaatgattctgaaggatatattggagaaggatgtgggattggatgtt
cggccgccatctttcaatagagcgtgcttggctttggctgagaggcaagaaaagatcaag
gctgcaaagctgcgcatatggaggattatgcgtcctaaaagtggtgggggcaatgatctt
attactgtattcgagccagagaaagcgaggaaaaagacaaggaaaagaaaatgtggtgtg
gagattgagtgggaagatctgataattgaaactctgctccttcataacgtcaaggaagag
gagatagaaaaaggacattacaatgctctgttagacttgcacgtgtttgctcatgttaat
gaatga
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