Salvia splendens (scarlet sage): 121780233
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Entry
121780233 CDS
T07627
Name
(RefSeq) single-strand DNA endonuclease 1-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121780233
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121780233
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Nebulin
Motif
Other DBs
NCBI-GeneID:
121780233
NCBI-ProteinID:
XP_042033704
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All DBs
Position
19:28046090..28050913
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AA seq
618 aa
AA seq
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MGVKNLWDILETCKKTLPLHHLQNKRVCVDLSCWMVQLQNVNRSHCPLKDKLYLKSLFHR
LRALLALNCSLIFVTDGSIPCIKLSTYRRRLNTGNEAMPIAHAKHTSQNVSSLKRNMGSE
FSCMIKEAKLLGIALGIQCLDGIEEAEAQCALLNAESLCDGCFTSDSDAFLFGARTVYRD
ICLGEGGYVTCYEMDDIERELGFGRDSLITLAILLGSDYTQGIRGVGPEHACQLVRAAGD
SSVLQRLASEGLSFAKKPKNSKKKGKITEGENKENYDDNKRDFNGNESDFPMDNQFLQVI
NAYMKPKCHSADSDAVNRVLALYQVNNNQLHQICAQYFDWTLEKTDEYILPKIAERNLRR
FANLRVTSSKLDLHPPINEMPVKCPISRIIKQRKIQGRDYFEVSWEDMDGVEASVVPADL
VQSACPEKIMEFRELKAQKQKPSRKPRQKQKRDTKELDRKLQQLVDEIEKESTTSNAIGE
TKIDAPTSRQKTVDIEEIDGKLQELTIDTEKESSGSGSTNPRGGMLQQQRMMHFGTSIGG
CSVAAEVIDLISPLPPRQCPVSKPRECVEVIELSDTENDATPQHARKMVRDQVSTAYDDY
LYKKSDNCASKSSVICFD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaatctgtgggatatcttggaaacttgcaagaaaactctcccccttcat
catctccagaacaagagggtgtgtgtggatttgtcgtgttggatggttcagcttcaaaat
gtgaacagatcccactgtccattgaaagacaagctctatttgaagagtctcttccaccgc
ctcagagccctccttgctttgaattgcagccttatcttcgtcactgacggctcaattccc
tgtatcaaattatctacatataggcgccgcttgaatactggaaatgaggcaatgccaatt
gcacatgctaagcatactagtcaaaatgtatcatctttgaaaagaaatatgggatctgaa
ttttcttgcatgatcaaagaagccaagttgctgggcattgcccttgggattcaatgccta
gatgggattgaggaggctgaagctcaatgcgctttgctgaacgcagaatcattatgtgat
ggatgttttacatcagattctgatgcttttctgtttggtgcaagaacagtttatagagac
atttgtttgggagaaggtggttatgttacttgctatgaaatggacgatatcgagagagaa
cttgggtttggaagggattccttgattactcttgctattcttctggggagcgattacacc
caaggaattcgtggggttgggccagagcatgcttgtcagcttgtgagagctgctggtgat
tcgtctgttcttcagcggcttgcatcagagggcttgtcatttgcaaagaagccaaaaaac
tcgaaaaagaagggcaaaattactgagggagaaaataaagagaattatgatgataacaag
agggattttaatgggaacgaatctgattttccaatggacaatcagtttttgcaagtgata
aatgcatacatgaagcccaagtgtcattcagcagactcagatgcagtgaacagggttctt
gctctctatcaagtcaacaacaaccagctgcatcagatttgtgctcaatatttcgactgg
acgcttgaaaagacagatgagtacatccttccgaagattgctgaaagaaacttgaggcga
tttgctaaccttcgagtcacttcttccaaattagacctccatccgccaatcaacgagatg
ccagtgaaatgtcctatatctaggattatcaagcaaagaaaaatccagggaagggactat
tttgaggtttcgtgggaagacatggatggagtcgaagcatcagttgtacctgctgatctt
gtgcagagtgcttgccctgaaaagatcatggagttccgggagctaaaagctcagaaacag
aagcccagtcgtaaaccaagacagaaacagaaacgagacacaaaggaactcgacagaaag
ctccaacaactggtggacgagattgagaaggagagcaccacctcgaacgccattggagag
acgaaaatagatgctcccacatcaagacagaagacggtcgacatcgaggaaatcgatgga
aagcttcaggaactgaccatcgacacagaaaaggagagcagtggtagcggctcgactaat
ccaagaggaggaatgcttcagcaacagaggatgatgcactttggtaccagcattggtggt
tgctctgttgctgcagaagttattgatcttataagtccgctgccgccacgacaatgtcca
gtgtcgaagccccgagagtgtgttgaggtgattgagttgagtgatacggagaatgatgcc
acacctcaacatgcaagaaaaatggttagagatcaagtctctacagcatatgatgactac
ctttataaaaaatctgataactgtgcttccaaaagtagcgtgatttgctttgattaa
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