Salvia splendens (scarlet sage): 121780322
Help
Entry
121780322 CDS
T07627
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121780322
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121780322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
121780322
NCBI-ProteinID:
XP_042033827
LinkDB
All DBs
Position
19:complement(25122510..25134551)
Genome browser
AA seq
1624 aa
AA seq
DB search
MMQRGPTPGLSSQPLPEMEQLNNTQQPPPQQQQQHRPSSSASSRAHHFHPARPAILELFN
LYLGRRSQQKSDESVREPPNKTQKRVTAINRELPPPNEQFLLDFEQIQSQFPDQEQLRAV
TESVLISLVIQCCNHAPRAEFLLFALRSLCNIGYINWDAFLPSLLSSVSSAETPVGQGSQ
AMALVACATSSQSGVPPPSNAIPNNANFQASNPASPLPSIHGIGSPAQSGAEPSTLSPMK
SNDVICTGQQSARANISVRENVISSLRQLSCKIILISLESNLMPVTRFDIFNHMLNWLVN
WDQRQQGLDEFDSAQFWKPDKALIEWLHDCLDVIWLLVDDNKCRVPFYELIRSGLQFIEN
IPDDEALFTLILEIHRRRDMMATHMQMLDQHLHCPTFGTPRLLLQATTTGETVTNMRYSP
ITYPSVLGEPLHGEELAASIQRGSLDWERAMRCLRHAFRNTPSPDWWRRVLLVAPCHRTQ
AQGPTPGAVFTSEMISEATIDRIVELLKLTNAETNCWQEWLIVSDVFFFLMKHGCIDFVD
FVDKLVCRLQDGDQHILRTNHVTWLLAQIIRVELVMNALNTDSRKVETTRKILSFHKEDR
SADPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGERIMD
YMNMDERSIGMFWVVSYTMAQPACETVMHWLTSAGVTEIPGTNLQPNERLMVMQEVSPLP
VSLLSGFSINLCLKLAYQMEESLFSGQVVPSIAMVETYVRVLLISPHALFRSLMTLLSPK
NQNPLSKPAASLLVFEILNYRLLSLYRYQGKNKGLIHDVTKIIATLKGKRGDHRIFRLAE
NLCMNLILSMREFFSVKRDGKGPTEFTETINRITITTLAIIIKTHGIAEVEHLLYLQTIQ
EQILATSQHAWSEKTLRHFPPILREALAGRIDNRGLATQAWQQAETTVLNQCTQLLSSSA
DPTYVMTYINHSFPQHRQYLCSGAWILMYGHPESINSLHLGHVLKEFSPEEVTANIYTMV
DVLLHHFNLELQCGRSLQELMMKACANLAFFIWTHELLPLDILLLALIDRDDDPHALRIV
ISILDSKELQQRVKLYLMNRGPAEHWLYSGVFKRTELQKALGNHLSWKERYPTFFDDIAA
RLLPVIPLIIYRFIENDAFDAADRVLHVYASFLHYYPLNFTFVRDILAYFYGHLPSKLII
RILTVLDVKKIPFSEAFPQHINSSNAPPLDYFATLLLGLVNHVIPPLNNNSKNGQVGEAS
NASVRAPHNKAQATSQGGPSVAPEGQKPFYQLQDPGTYTQLILETAVIEILSLPITASQI
VSSLVQIVVHIQPTLVQSSNGLHPTSVGQSSVLPTSPSGGSTDSLGATRTPTAAGLSNSN
FVWRSGYTCQQLSCLLIQACGLLLAQLPPEFHIQLYIEAARVIKESWWLSDGKRSVSELE
SAVCYALLDPTWAAQDNTSTAIGNVVALLHAFFSNLPLEWLEGTHLIIKHLRPVTSIAGL
RIAFRIIGPLLPRLANAHTLFNKTLSVLLSVMADVFGRNSQPSAPVEASEIADIIDFLHH
IVHYEGQGGPVQASSKPRAEVLALIGRAAESFSPDVQHLMTHLKADVNCSIYAATHPKFV
QNAN
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcggggtccgactccgggcctctcgtcccagcccttgccagagatggaacag
ctcaacaacacgcaacagccgccgccgcaacagcagcagcagcatcgaccttcttcctcc
gcctcttcccgtgcccaccatttccaccccgcccgacccgccattctagaactcttcaat
ctctacttgggcaggagatcgcagcagaaatcagatgaatcagttagggaacccccgaac
aagacacagaagcgggttactgctattaacagagagcttcctccccctaatgagcagttc
ctcttggactttgagcagatacagagccaatttcctgaccaggagcaactacgcgctgta
acagaatctgtcctaatatctcttgttattcaatgctgtaatcatgctcctagagcagag
tttctgctctttgctttgcgtagtttgtgcaatataggatacataaactgggatgcattc
ctgccgtctcttctttcttcagtttcttctgcggagaccccggttggtcagggcagtcaa
gctatggctcttgttgcttgtgcaacttcatcacagtcaggagtcccaccaccttcaaat
gccattcctaataatgctaattttcaggcatctaatcctgcgtctcctttgccgtcaatt
catggcattggatctcctgcacaatcaggtgctgagccatccacgctgtctccgatgaag
tcaaatgatgtcatctgcactggtcaacagtcagcgagggccaatatatctgtcagagaa
aatgttataagcagtttacgtcaactttcctgcaagataattttgattagccttgagtct
aatctaatgccagtcacacgcttcgatatctttaaccacatgttgaattggcttgtcaat
tgggatcaacggcagcaagggcttgatgaatttgatagtgcacagttctggaagcctgat
aaggccctaattgagtggttacatgattgtctagatgttatttggctgttagttgatgat
aataaatgccgtgtgcccttttacgagctcatacgcagtggtttgcaatttattgagaac
ataccagatgatgaggcactgtttacccttatcttggaaattcatagaaggagagatatg
atggcaacccacatgcaaatgttagatcaacatctacattgccctacatttggaactcct
cgactcttacttcaggcaactaccactggtgagacagtgacaaacatgagatattcacca
atcacatatccaagtgtacttggagaacctttgcatggagaggaacttgcagcatccatt
cagagagggagtcttgactgggagcgagctatgcgatgtctgagacatgcctttcgcaac
actccatctccagactggtggagacgtgtattgcttgtagcaccctgccacaggactcag
gcccaaggacctacaccaggtgctgtttttacttcggaaatgattagcgaggcaacaatt
gataggattgtggaattgctgaagttgacaaatgcagaaacaaattgctggcaggagtgg
cttattgtttctgatgtattcttttttctcatgaaacatggatgcattgattttgttgat
tttgttgacaaactagtgtgtcgacttcaagacggtgatcaacatatcctcaggaccaat
catgtgacatggttgcttgcacaaattatccgtgttgagcttgtaatgaatgctctaaat
acagactcaagaaaggtggagacaacccggaaaattctttcattccataaagaagaccga
agtgctgaccctaataacccacaaagtatcttgctggacttcattagcagttgtcagaat
ttgcgtatttggtcattaaatacatcaactagagaatatttgaacaacgagcagcttcaa
aagggaaaacaaatcgatgaatggtggaggcaagttagcaaaggtgaaaggatcatggac
tatatgaatatggatgaaaggtcaattggtatgttttgggttgtctcatacactatggca
cagcccgcttgtgaaacagttatgcactggttaacctcagctggagtaacagagatacca
ggaacaaatctacagccaaatgaaaggttgatggtgatgcaggaagtcagcccattgcca
gtatcgctgttatctgggttttcaataaatttatgtctgaaacttgcatatcaaatggaa
gagtctttgttttctggacaggttgtacctagcattgcaatggtagaaacatatgttcga
gtattgctcatttcacctcatgcactatttcgctcactcatgacgctactgtctccaaag
aatcaaaacccactgagcaaacctgctgcttctcttctggtgtttgaaattctgaactat
cggttactttcactctacaggtaccaagggaaaaacaaaggtttaattcatgatgtcaca
aaaattattgctacactgaagggaaaacgtggtgaccatcgtatttttcggctggctgag
aatttatgcatgaatcttatattatcaatgagggaatttttctctgtgaagagggatgga
aagggtccaaccgagtttacggaaactataaatcggataacaataactactcttgccatc
attattaaaactcatgggattgcggaggttgaacacctgctataccttcaaacaattcag
gaacagatacttgccaccagccaacatgcatggtcagagaagaccctccgccacttccct
cctattttgcgagaggccttagctggtcggatagataataggggcttggccactcaagca
tggcaacaggcagaaacaactgtgcttaatcaatgcacccagcttctatcttcttctgct
gatcctacgtatgtcatgacttacattaatcacagttttcctcaacaccgtcaatatctt
tgctctggtgcatggatactgatgtatggccaccctgagagcattaacagtttacatctt
ggtcacgtcctgaaagaattttcccctgaagaagttactgccaatatctatacaatggtg
gatgtcctattgcatcatttcaatctagaacttcagtgtgggcggtctttgcaggagctt
atgatgaaagcttgtgccaaccttgcattcttcatttggactcatgagctattgccatta
gacattttactgctagcacttattgatagagatgacgatccccatgctctgcgaattgtg
ataagcatacttgacagcaaagaacttcaacaaagggtgaaactgtatcttatgaatcgt
ggtccagctgagcattggctttactctggagtttttaagcgtactgaattgcaaaaggcc
cttggaaatcatctgtcgtggaaggaaaggtacccgacattttttgatgatattgctgca
agattgctcccggtgattcccctaatcatttataggtttatcgagaatgatgcttttgat
gctgctgacagagttctgcatgtttatgcatcattccttcattactatcctttgaatttc
acatttgtgcgtgatatacttgcctatttctatggtcatcttccaagcaaacttatcatt
cggatattgactgtattagacgtgaaaaagataccattttccgaagccttccctcagcat
atcaactcgtctaatgctcctccactagactattttgctacacttctactgggcctggtg
aatcatgtaattcctcccctgaacaacaactctaagaacgggcaagttggagaagcctca
aatgcttctgtgcgagcgccgcataacaaggctcaagcaacatcacagggtggtccatct
gttgctcctgaaggccagaaaccattctatcagctccaggatcccggtacatatacacag
ttgattcttgaaacggctgttatagaaatcctctctcttcctataactgcatcccagatt
gtatcctcacttgttcaaatcgttgttcacatacaaccaactctggtccaatccagcaat
gggttacacccaactagcgtcggccaaagttctgtgttgcctacttctccatcaggggga
agcactgactccttgggcgctactaggactcccacagcagcaggattaagtaactctaac
tttgtttggcgaagtggttatacgtgtcaacagttgtcttgcttgttgatccaagcttgt
ggtctgcttttggctcagctacctcctgagtttcatattcaactctatatagaggcggcg
cgtgtaataaaggagagctggtggctttccgacgggaaaagatcagtctctgaattagaa
tctgccgtttgctatgctttattagatccaacatgggctgcccaagacaacacctctaca
gccattggtaatgtggtggcactgctgcatgctttcttcagtaaccttcctctagagtgg
ctggaggggacacatctcattatcaagcatctcagacccgtgacatcaatagctggattg
agaatagctttccgtattataggccctttactccctcgattggccaatgctcacaccctc
ttcaataagacgctatcggtgctgttaagtgtaatggcagatgtctttggaaggaattca
cagccatcagctcctgtcgaagcatctgagatagctgatattatagacttcctgcaccat
atagttcattacgaagggcaaggcggacccgtgcaagcgagcagcaagccgagagcggaa
gtgctggctctcatcggaagagcagctgagagtttcagcccagatgtacagcatcttatg
actcacttaaaagctgatgtgaactgttcgatatatgcagctacgcatccaaagtttgtt
cagaacgccaattaa
DBGET
integrated database retrieval system
