Salvia splendens (scarlet sage): 121780554
Help
Entry
121780554 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121780554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121780554
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121780554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121780554
NCBI-ProteinID:
XP_042034076
LinkDB
All DBs
Position
20:27315234..27319296
Genome browser
AA seq
434 aa
AA seq
DB search
MGLPIYDGSLDTSEEVSYKLAAVNSLRIGDIKRRLLNIFLLSGFAFVYMEDERDAEDAIR
ALDRIEFGKKGRRLRVEWTKQERSSRRPESSKKTSSNTRPSKTLFVINFDPYHTRTRDLE
RHFDPYGKILNIRVRRNFAFIQFESLEDASKALDATNMSKLLDRVITVEFAIKDDDDRRN
GNSPDRVRDRSPRRGYDRARSQSPYRRERGSPDYGHSRGRSPSPYRRERASPDYTRGSSQ
SPNRKERGSPNRKVRRSPIRRERASPDYTRGSSQSPNRKERGSPNRKVRRSPIRKERDSS
DRKERESPDRKVRGSPDRKERGSPNRKEREHRRDHERSPSPEKEEGETTDHNNEQSLSPQ
TKNSNGDISNGLNPGKSGSPGYDCVPGASPQREKTEKASNPDEFARERSPAYSDGESPPP
DRFGSQSPGAREKY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcccatctatgatggatcattagatacttctgaagaggtttcctacaaattg
gctgcagtaaacagtttaaggattggtgatattaagagaaggctcttgaacatttttttg
ttatcaggttttgcttttgtctacatggaggatgaaagggatgctgaggatgcaattcgt
gcacttgaccgaattgaatttggtaagaagggtcgtcgacttcgtgttgagtggaccaag
caagaacggagtagcaggcggccagaaagctccaaaaaaacttcatctaacacaagaccc
tcaaagaccctctttgtcataaactttgatccgtatcatacaagaacaagagatttagaa
aggcattttgatccttatggaaaaatattaaatatacgggtgaggagaaattttgcgttc
attcagtttgaatctctggaagatgcatcaaaagctttggatgctactaacatgagcaaa
ttgttggatcgtgttattacggttgaatttgctatcaaggatgatgatgataggcgaaac
ggaaatagccctgaccgagttcgtgacagatcacctaggagaggctatgatagggcaaga
tctcagagtccgtacaggagagagaggggcagtcctgattatgggcacagtcgtggccgt
agcccaagtccgtatcgcagagagcgagcaagtcctgactatactcgtgggagtagccag
agccccaataggaaggaaagggggagccccaataggaaggtaaggaggagccccattagg
agagagcgagcaagtcctgactatactcgtgggagtagccagagccccaataggaaggaa
agggggagccccaataggaaggtaaggaggagccccattaggaaggaaagggatagctcg
gataggaaggaaagggagagtcccgataggaaggtaagggggagcccggataggaaggaa
agagggagcccgaataggaaggaaagggagcatagacgcgatcatgagcggagtccaagt
cctgagaaggaggagggagagactactgatcacaacaatgaacaaagcttaagccctcaa
acaaagaattccaatggtgatataagcaatggcctgaatccaggaaagagtggaagtccc
gggtatgattgtgtgcccggtgcaagtcctcaaagagagaaaactgagaaggcatctaac
cctgatgaatttgctcgtgagagatctccagcttacagtgatggagaaagccccccgccc
gatagatttgggagccaatcacccggggcacgggaaaaatattga
DBGET
integrated database retrieval system
