Salvia splendens (scarlet sage): 121780569
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Entry
121780569 CDS
T07627
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121780569
03410 Base excision repair
121780569
03420 Nucleotide excision repair
121780569
03430 Mismatch repair
121780569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121780569
03036 Chromosome and associated proteins [BR:
sspl03036
]
121780569
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121780569
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121780569
DNA Replication Termination Factors
ELG1-RFC complex
121780569
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121780569
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121780569
Check point factors
HRAD17(Rad24)-RFC complex
121780569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_assoc_2
AAA_11
AAA_22
DUF815
AAA_5
AAA_14
ATPase_2
RuvB_N
AAA_24
AAA_7
AAA_3
AAA_30
DNAX_ATPase_lid
ResIII
AAA_2
bpMoxR
AAA_19
AAA_25
nSTAND3
AAA_18
Mg_chelatase
RNA_helicase
AAA_28
SLFN-g3_helicase
DUF3086
Motif
Other DBs
NCBI-GeneID:
121780569
NCBI-ProteinID:
XP_042034098
LinkDB
All DBs
Position
20:complement(4181637..4184736)
Genome browser
AA seq
364 aa
AA seq
DB search
MAKVIDVMDIDDDNGNFNSAKPNLKGKNVVVSAAPPDTRATPWVEKYRPQSLDDVAAHRD
IVETIDRLASGNRLPHLLLYGPPGTGKTSTVLAMARKLYGNKLQNMVLELNASDDRGIDV
VRQQIQDFASTQSISFGGKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKSNRFALICNN
VNKIIPALQSRCTRFRFAPLDAVHVRDRLRHVIESEGLDVPENGMKALVQLSNGDMRKAL
NILQSTHMACQQITEEAVYLCTGNPLPKDIEQISHWLLNEPFTTSSQRISEMKTRKGLAL
VDIVREVTMFVFKIKMPPAVRIQLINDMADIEYRLSMACNDKLQLGSLIAAFTRARGSLV
AAGT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagtgatagatgtcatggatatcgacgacgacaacggcaatttcaattccgcc
aagcccaacctcaagggcaaaaacgtcgtcgtttcagctgctccaccggacaccagagcc
acgccctgggtcgagaaatatcgcccccagtctctcgatgacgtcgccgcccaccgtgac
attgttgagaccattgatagattagcatctgggaacagattgccccatttgctgctttat
ggaccgccagggacagggaagacttctaccgttttggcaatggctcggaaactttatgga
aacaagttgcaaaacatggttctggagttgaatgcatccgatgatcgtggtattgatgtt
gttaggcagcagattcaagactttgcaagcacacagagcatctcttttgggggaaagtct
gccgtaaaattggttctactggatgaggcagatgccatgactaaggatgcacaatttgct
cttcgtagagtgattgagaaatacaccaaaagcaatagatttgctttgatctgcaacaat
gtcaataaaattattccagcactgcaatcaagatgtacacggttccgctttgctcctctt
gatgctgttcatgtcagggataggctcagacacgtaattgaatctgaagggcttgatgtt
ccagaaaatggtatgaaagctcttgtacagcttagcaacggtgatatgaggaaagccttg
aatattttacagtcaacacatatggcctgtcagcagatcacagaagaagctgtctacttg
tgtactgggaaccctttgcccaaagacatcgagcagatatcccattggctcctgaatgag
ccattcacaactagcagccaaagaatatctgagatgaagaccagaaaagggttggctctg
gttgatatcgtcagagaagttaccatgtttgtttttaagatcaagatgccaccagctgtc
cgcattcaacttattaacgatatggctgatatcgaatataggttgagcatggcatgcaat
gacaagctgcagctggggtcactaattgctgcttttacacgagccagaggttcgctagtt
gctgctggaacataa
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integrated database retrieval system
