KEGG   Salvia splendens (scarlet sage): 121780969
Entry
121780969         CDS       T07627                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03020  RNA polymerase
sspl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121780969
  09124 Replication and repair
   03420 Nucleotide excision repair
    121780969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121780969
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121780969
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     121780969
  RNA polymerase III system
   RNA polymerase III
     121780969
  RNA polymerase I system
   RNA polymerase I
     121780969
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121780969
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat OB_RNR_1st PepSY_2
Other DBs
NCBI-GeneID: 121780969
NCBI-ProteinID: XP_042034570
LinkDB
Position
20:complement(5347011..5349870)
AA seq 205 aa
MVLLEEEITRLFRIRKTVMQMLKDRGYMVGDFEIEMTKYEFVQKYGENMKREDLVINKGF
RNSSEQIYVFFPEEQKVGVKTMKTYTNRMKEEGVHRAILVVQQNLTPFARTCVSEISTKF
HLEVFQEAELLVNIKEHVLVPEHQLLTAEEKKTLLERYTVKETQLPRIQITDPIARYYGL
KRGQVVKIIRPSETAGRYITYRYVV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggttttgttggaagaggaaattacccggcttttcagaatccggaagacagtgatgcag
atgttgaaggatagaggttacatggtgggagattttgagattgaaatgacaaagtatgag
ttcgttcagaaatatggcgagaatatgaagagagaggacctcgttattaataaaggcttc
cgtaatagctctgaacagatatacgtcttctttcccgaggaacagaaagttggtgtgaag
acaatgaagacctacactaatcgaatgaaagaagaaggtgttcatcgggcaatcttagtg
gtccagcaaaatttaacaccgtttgcaaggacctgcgttagtgaaatatcaactaaattt
cacttagaagtcttccaggaagctgagttgttagttaacataaaagaacatgttctagtt
cccgagcatcagctgcttacggctgaagaaaagaagacgttgctggagaggtacaccgtg
aaagaaacacagctccctcgtatccagataactgacccgattgcaagatactatgggctc
aagcgagggcaggttgtgaagatcatacgaccgagtgaaactgctggacgttatatcacc
taccgatacgttgtttga

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