Salvia splendens (scarlet sage): 121781266
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Entry
121781266 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121781266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121781266
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121781266
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
121781266
NCBI-ProteinID:
XP_042034944
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Position
2:complement(344362..347373)
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AA seq
582 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDRDRNAVSLVCKSWYDIERWCRRRIFVGNCYAVSPEMVIRR
FPELRAVEMKGKPHFADFNLVPEGWGAYAYPWIAAMAEAYPFLEEIKLKRMVVTDDTLEL
ISKSCKNFKLLVLTSCEGFTTDGLASIAANCRHLRELDLRESEVEELSGHWLSHFPDSCT
SLVSLNISCLGSEVSFSILERLVARSPNLRTLRLNRAVPLERLANLIRRAPQLVELGTGA
YSAEIRSDTFSNLADAFSACKQLKALSGFWDVVPSYLPAMYSVCSGITSLNLSYAAIPST
DLVKLISQCQNLQRLWVMDYIEDSGLDVLAASCKDLQELRVFPSDPFGAEPNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALIAIAKNRPNFIRFRLCIIDPQAPDYLTLEPLDAGF
GAIVEKCKELRRLSMTGLLTDRVFKYIGSHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKMPRLNVEVIDERGPP
DSRPESCSVERVYVYRTVASRQRLDMPDFVWTLDEDSSLRYS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagttctggagcatgtgttctccttcctgagctccgac
agggaccggaacgccgtgtccttagtttgcaagtcgtggtacgatattgagcggtggtgc
cggcgccgcatattcgttgggaactgctacgccgtgtctccagagatggtgatccggcgg
ttcccggagctgagggcggtggagatgaaggggaagccgcatttcgctgatttcaacctc
gtgccggagggctggggcgcttacgcctacccctggatcgcggccatggcggaggcctat
cccttcctggaggagatcaagctcaagcgcatggtcgtcacggacgacaccttggagctc
atctccaagtcttgtaagaatttcaaacttctggtgctcacgtcttgcgagggtttcacc
acggatggtctcgcgtcgattgcggctaattgcaggcatttgagggaactagatttgagg
gagagtgaagtggaggagctgagtgggcattggcttagccattttcctgatagctgcact
tctttggtgtcgcttaacatttcttgtctgggttctgaggtaagtttctccatcttggag
cggctggttgcacgttcccctaacctgaggactctccgcctgaaccgtgctgtgcccctt
gagaggcttgctaacctgattcggcgtgctccccaattggttgaattaggtaccggtgcc
tattcagctgaaattcgatctgatacattttcaaatctggctgatgcattttcagcctgt
aagcaacttaaggctttgtctggtttttgggatgtggttccttcttatcttccagccatg
tattctgtctgttctggaatcacttcgctgaatttaagttatgctgccattccgagtacc
gatcttgttaagcttattagccaatgccagaatttgcagcgtctgtgggtgatggactac
atcgaagacagtggattggatgttcttgctgcatcttgcaaggatctgcaagaacttagg
gtgttcccttctgatccttttggagcagaaccaaatgtgtctttgacggaacaagggctt
gtgtctgtctctgaaggctgccccaagcttgaatctgttctttacttttgccgccagatg
tcaaatgctgcactgattgctattgcaaagaatcggcctaattttatccggttccgcctc
tgtatcattgatcctcaagcacctgactacttaaccctcgaaccacttgatgctggtttt
ggagccattgtggagaagtgtaaagaattgcgccggctttccatgaccggcctcctcact
gaccgcgtgttcaaatacattggatcacacgccaagaagctggagatgctttcaatagcc
ttcgcaggggatagtgacttgggcctccatcacgtgttgtctggctgcgacagcctccgg
aaactagagatcagggactgcccatttggggacaaggctctcttggccaatgctgcaaag
ctagagacaatgcgatccctttggatgtcttcttgttctgtgagttttggagcttgtaag
ctgctggcacagaagatgcctaggctcaacgttgaagtcatagacgagagaggcccacct
gattcaaggcctgaaagctgctctgttgagagagtgtatgtgtatcgcactgtcgctagc
aggcagaggctcgacatgcctgactttgtctggactcttgatgaggattcatccttgagg
tattcctaa
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