Salvia splendens (scarlet sage): 121781461
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Entry
121781461 CDS
T07627
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121781461
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121781461
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
AAA_15
RsgA_GTPase
MMR_HSR1
AAA_28
AAA_23
DUF5906
nSTAND_NTPase5
AAA_30
AAA_16
VapE-like_dom
MukB
DUF6079_1st
Motif
Other DBs
NCBI-GeneID:
121781461
NCBI-ProteinID:
XP_042035135
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Position
2:553496..556999
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AA seq
596 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKATASKVAAPENGSSKVDSLANGVGDLHISDRTCTGV
LCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLASIGAREL
PIPEHMDIYHLSREIEASDMSSLQAVISCDEVRLKLEKEVEILSAKDDGGGEALELIYER
LDALDAATAEKRAAEILFGLGFTKQMQEKKTRDFSGGWRMRIALARALFMNPTILLLDEP
TNHLDLEACVWLEEMLKKFERILVVVSHSQDFLNGVCTNIIHMQSKKIKLYSGNFDQYCQ
TRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV
ARDKVLVFRFTDVGKLPPPVLQFVEVKFGYTPDNLIYKNVDFGVDLDSRVALVGPNGAGK
STLLKLMTGDLVPQDGMVRRHNHLRIAQFHQHLAEKLDVEMSALQYMMREYPGHEEEKMR
AIVGRFGLTGKAQVMSMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAE
ALNEWDGGLVLVSHDFRLINQVAKEIWVCENQAVTRWEGDIMDFKRHLRARAGLLD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgatgcgagtaaaaagaaggcggctcagaagaaggctgccgccgctgctaaa
agagggggtaaggccaccgcatccaaggtggctgcgccagaaaacggtagcagcaaggtt
gatagtctggccaatggagttggggatcttcacatatctgatcggacgtgtaccggcgtt
ctctgctcccatcctttgtcaagagatattcggatagaatcactttccctgactttccat
ggccatgatcttattgttgactctgaactggaattgaattatggcagacgttatggattg
cttggtttgaatggttgcggaaaatctactcttcttgcttcgataggtgcccgtgagctt
cctattccagagcacatggatatttatcacctttctagagaaattgaagcttctgatatg
tcctcacttcaggccgtcataagttgtgacgaggtgcgcctgaaattggagaaagaagtt
gaaatattgtctgccaaggatgatggtggtggagaggcccttgaactcatttatgaacgg
ttggatgctttggatgcagccactgctgaaaagcgagctgctgagattttatttggtctt
ggctttaccaagcaaatgcaagagaagaagacacgtgacttttctggaggctggaggatg
aggattgctctagcaagagctcttttcatgaacccaaccatattgctgcttgatgaacca
acaaatcatctagatttggaggcatgtgtctggttagaggagatgttgaagaagttcgag
cgaattcttgttgtggtttcacattcccaggatttcctgaacggagtatgcaccaacatc
atacatatgcagagtaagaagataaagctctactctggaaatttcgaccagtattgccaa
accagatctgaacttgaggagaaccagatgaaacaatacaagtgggagcaggagcagata
gcttcaatgaaggaatacattgcacggtttggtcatggatctgctaagcttgcgcgtcag
gcccagagtaaagagaaaactttggcaaagatggagcgtggaggtcttacagagaaggtg
gcccgggataaggtccttgttttcagatttactgatgttggaaagctccctcctcctgtt
cttcagtttgtggaagtgaaatttggctacactcctgataatctcatctacaagaatgtt
gattttggtgttgaccttgattcgagagtggcactggtgggacctaatggtgctgggaaa
agcaccctgctaaagctgatgacaggggatttggttcctcaggatggcatggttcgtcgc
cataaccacttgaggatcgcacagttccatcagcatttggctgagaaacttgatgtggaa
atgtcagccctccagtatatgatgagggagtatcccggacatgaagaagagaagatgaga
gccatagttggaaggtttgggctcaccggcaaagcacaagtgatgtctatgaagaacttg
tctgatgggcaaaggagccgtgtgatctttgcatggctagcttggaggcaaccgcacatg
ctactgctggatgagccaactaaccatctggatattgagacgattgactcactggcggag
gcacttaatgaatgggatggtgggttggttcttgttagccacgatttcaggctgataaac
caggtcgcgaaagagatatgggtttgcgagaatcaggccgtgactcggtgggagggagac
atcatggacttcaagcggcacctaagggcgagagccggcttgttggactga
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