Salvia splendens (scarlet sage): 121781969
Help
Entry
121781969 CDS
T07627
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121781969
Spliceosome [BR:
sspl03041
]
Complex B
Other components
Complex B specific factors
121781969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
LisH_TPL
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_HPS5
Mala_s_1-like
VPS8_N
DUF7165
Beta-prop_LRRK2
Beta-prop_IFT122_2nd
WD40_like
zf_topless
7TMR-HDED
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
121781969
NCBI-ProteinID:
XP_042035602
LinkDB
All DBs
Position
2:complement(937450..943210)
Genome browser
AA seq
514 aa
AA seq
DB search
MSSTLEIEARDVIKIVLQFCKENSLHQTFHTLQSECQVSLNTVDSHETFVADINSGRWDA
ILPQVAQLKLPRKTLEDLYEQIVLEMIELREIDTARAILRQTQVMGVMKQEEPERYLRLE
HLLVRTYFDPNEVYQDSTKEKRRAQIAQAVAAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDVEDMYPTTLGHTIKFGKNSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDEAVLCVDFSRDSEMIASGSQDGKIKVWRIRTGQCL
RRLERAHGEGVTSVSFSRDGTQLLSASFDTTARIHGMKSGKILKEFRGHSSYVNDAIFTA
DGSRIITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCNKT
SSIYIMTLQGQVVKSFSSGKREGGDFMAACVSTKGEWIYCVGEDRNLYCFSYQSGKLEHL
MKVHEKDVIGITHHPHINLIATYGEDCTMKLWKP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacgctagaaatcgaagctcgagatgttatcaagattgtactacaattctgc
aaagagaattctctgcatcagacttttcatacactgcagagcgagtgtcaggtttctctg
aatacagtggacagccatgagacttttgttgctgatattaatagtgggaggtgggatgca
atcttgccacaagttgcccaacttaaacttccaaggaaaacattagaagatctatatgag
cagattgttctagaaatgattgaactccgggagattgatactgcccgtgcaattttaaga
caaactcaagtgatgggcgtcatgaaacaggaggaaccagagagatacttacgacttgaa
catctactggttcggacttactttgacccaaatgaggtgtatcaagactctacaaaggag
aaaagacgtgctcaaatagcccaagctgttgcagctgaagtttcagtagttccaccttca
cggttgatggctttgatcggccaggctttaaaatggcagcagcatcaaggtttactgcca
cctggaacacaatttgacctgttccgaggtactgctgctatgaaacaagatgtagaagat
atgtacccgacgacacttgggcacactattaagttcgggaagaacagtcatcccgagtgt
gctcggttttctcctgatggccaattccttgtttcttgttcagttgatggatttattgag
gtctgggaccatataagtgggaaactgaagaaggatctccagtaccaggctgatgaaaca
tttatgatgcatgatgaagctgtcctatgtgttgattttagtagggactctgagatgatt
gcatccgggtcacaagatggaaaaataaaggtttggcgtatccgaactggtcaatgcttg
cgtcgacttgagcgcgcacatggtgaaggtgtcactagtgttagtttttctcgagacgga
acccaattgttgagtgcatcatttgacaccactgctagaattcatggcatgaaatccggg
aagattttgaaagagttccgtggtcattcatcatatgttaatgatgccatcttcacagct
gatggctctcgtatcataactgcatccagtgattgcacggtgaaagtttgggatgtgaag
actacggattgtctacagacatttaagccaccacctccactacggggaggtgatgcgtct
gtgaattctgttcatcttttcccaaaaaatacagatcacattgttgtctgcaacaagaca
tcgtcaatatacatcatgacactccaagggcaggtggtaaaaagtttttcatcgggtaaa
agagaaggtggtgattttatggcagcttgtgtatcaaccaaaggagagtggatttattgt
gtcggtgaagacagaaatttatattgcttcagttatcaatctggcaagctagagcatcta
atgaaggtacacgagaaggatgtgataggcatcactcaccatccccacataaacctcatc
gccacctatggcgaagactgcaccatgaaattatggaagccgtaa
DBGET
integrated database retrieval system
