Salvia splendens (scarlet sage): 121781978
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Entry
121781978 CDS
T07627
Name
(RefSeq) DNA mismatch repair protein MLH1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03430
Mismatch repair
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121781978
03460 Fanconi anemia pathway
121781978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121781978
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121781978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121781978
NCBI-ProteinID:
XP_042035609
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Position
20:7951554..7958082
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AA seq
736 aa
AA seq
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MELEAQASDRMDMEECTPTPLQRDPPVIRRLDEEVVNRIAAGEVIQRPLSAVKELVENSI
DAGSASITVVVKDGGLKLVQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFR
GEALASMTYVGHVTVTTITKDQLHGYRATYKDGVMGCEPKACAAVKGTQIMIENLFYNMA
ARKKTLQNSADDYPKIVDLICRFAIHHMNINFSCRKHGAARADVQSVSKSSRLDAIRSVY
GVSVAQNLLKIEVSDDPSSSSFKMDGFISNSNYIAKKIAMVLFINDRLVECGALKRAIEI
VYAATLPKASKPFIYMSIKLPPEHVDVNVHPTKREVTLLNQEIIIEKIQYAIESKLRNSN
ESRTFREQKVDTLDNSVSTSKAASTPPSSFGTKPQKVPVHKMVRTDSQDPAGRLDAYLQS
SQSSQMQRNSCLASMRSSIKERRNSRETADLTSIQELIREIDSSCHTELLDLVGHCTYLG
MADDVFALLQHNTHLYLANVVNLSKELMYQQVLRRFAHFSAIQLSVPAPLRELVMLALKE
DELEPEGIEHENLKEKIAEMNTKVIKQKSEMLEEYFGIHIDPDGNLSRLPIVLDQYTPDM
DCVPELILCLGNDVNWDDEKDCFQTIAAAIANFYAFHPPLLPNPSGESLQFYKRSPPGDP
EEGSTSHSPDDIPEEQIEQDLFLEAERAWSQREWSIQHVLFPSMRLFLKPPTSMATDGTF
VKVASLEKLYKIFERC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaagctcaagcctccgatcgaatggatatggaagaatgcacacccactcca
cttcaaagggacccgccggtaatccgacgcttggacgaggaggtggtcaacagaatcgcc
gccggtgaggtcatccaacggccgctctccgccgttaaggagctcgtcgagaacagcatc
gacgccggctcagcttccatcaccgtggtagtgaaggatggtggcctcaaactcgtccaa
gtctccgacgacggtcatggaattcgatatgaagatcttccaattttatgtgaaaggcat
acaacctctaaactgagtaaatatgaggacttacaatctatcaaatccatgggatttaga
ggcgaggcgttagcaagtatgacgtatgttggtcatgtgacagttaccaccataactaaa
gatcaattacatggatacagggcaacttataaagatggtgtgatggggtgtgaaccaaaa
gcatgtgcagctgttaaaggcactcaaattatgatagagaatttgttttataacatggct
gcaaggaagaaaacacttcagaattccgctgatgactacccaaagatagtcgatttaatt
tgccggtttgccatccatcacatgaacataaacttctcttgcagaaagcatggagctgct
agagcagatgttcaatcagtttctaaatcctcaaggcttgacgcaatcagatctgtctat
ggggtatcagttgcacaaaaccttttgaagatagaagtctctgatgatccatcgagttca
agtttcaagatggatggatttatttctaattctaactacatcgcaaagaagatagctatg
gtgctattcatcaatgatagactcgtggagtgtggtgctctaaagagagcaatcgagatt
gtttatgctgctacattgccaaaggcatccaaacctttcatctacatgtcaatcaagttg
ccacctgaacacgttgatgtaaatgtgcacccaactaagagagaggtaaccctcctgaac
caagaaattataattgagaagatacaatatgctattgagtcaaaattgaggaattccaat
gagtcgaggacatttcgagaacagaaagtggataccttagataattcagtttctacgagc
aaggctgcctcaactcctccctcgtcttttggaacaaagccacaaaaagttcccgtgcac
aaaatggtaaggacagattcccaggatcctgcaggaaggttggatgcatacctgcagagc
tcacagtctagtcaaatgcaacgaaattcttgcttggcctccatgaggtcttcaatcaaa
gaaaggaggaactccagggagactgcagaccttactagcattcaggaacttatcagagag
attgactctagctgccacactgagttgctggaccttgttggacactgcacgtaccttggg
atggcagacgatgtttttgctctgctgcagcacaacactcatctgtacctagctaatgtg
gtcaacttgagcaaagagctcatgtaccagcaagttttacgtcgatttgcacactttagc
gcaattcaactgagtgttcccgctcctctgcgggaattagtaatgctggctctaaaggag
gacgagttggaacctgaaggcattgaacatgaaaacctgaaagaaaagatagcagaaatg
aatacaaaggtgatcaagcagaaatctgagatgttggaggaatactttggcattcatatt
gacccggatggtaatttgtcccggctgcccattgtacttgaccaatacacacctgacatg
gattgtgttccagagcttattctttgtttgggcaatgatgttaattgggatgatgaaaag
gactgttttcaaacaatcgctgcagctattgcgaacttctatgccttccatccccctttg
ttgccaaatccatcaggtgagagcttacaattttataaaagatctcctcccggagatcct
gaagaaggaagtacgtcacacagtcctgatgacataccggaagaacaaattgagcaagat
ctatttttggaggctgaaagagcatggtcacagcgtgaatggtcgattcagcatgttttg
ttcccctccatgaggcttttcctcaagcctcctacatcaatggctacagatggaactttt
gtcaaggtggcttcattggagaaactttacaaaatttttgaaagatgctaa
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