Salvia splendens (scarlet sage): 121782082
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Entry
121782082 CDS
T07627
Name
(RefSeq) ribosome biogenesis protein bms1-like
KO
K14569
ribosome biogenesis protein BMS1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121782082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121782082
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
GTPase
121782082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA_16
AAA_22
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121782082
NCBI-ProteinID:
XP_042035719
LinkDB
All DBs
Position
20:20712854..20721841
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AA seq
1180 aa
AA seq
DB search
MGKDGEGGEQPHKSHRVRKSGASAKKKSKSKPNSTEGLSKELQKINNPKAFAFTSSKKAK
RLQSRATEKEQKRLHLPTIDRNIGEPAPFVVVVQGPPQVGKSLLIKCLVKHYTKHDLPEV
QGPITIVSGKQRRLQFVECPNDINGMIDCAKFADLALLLIDGSYGFEMETFEFLNILQNH
GFPRVMGVLTHLDKFEDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYTKREVHN
LARFISVMKFPPLSWRASHPYILVDRFEDVTPPEKVHMNSKCDRNVTLYGYLRGCNLKKG
TRAHIAGVGDYHLSGVTALADPCPLPSVAKKKGLRDKEKLFYAPMSGLGELLYDKDAVYI
NINDHFVQFSKDDGANPEGTEKGKQRDVGVELVKSLQNTKYSVDEKLEKSNISVFGKKPH
ISEAPEAVGRDVLLEPVDHYESDIKDEDSDSDEEDDTDDENDPESLEKDHSTQSNYKEEF
DLDRGRVRRKAVFENEMDIDNKDSGEDDDSDSNDSDETEKGDEDMLSDSGSSEDKEDEMG
NISKWKESLLERTSSRRNINLEQLVYGTSGSKSSDDMKDAVEEESDEEFFKPKGEGKKKS
NEGINDNDVDIDDCSKFVSTGSLKDWKNEDLIESIRDRFVTGNWSNAKARNELSEGTVGD
DGEVLGDFEDLETGQKYEGDHTDDVGISNKDDALAAEERKLKKLALRAKFDAQYNGSEAP
DEEEDGKDDTKTNRGQSNGDGYSDTLKEKMELQKQTNIAELADVDEDKRVEIEGFRTGTY
LRIEVRDVPYEMVDNFNPFHPILVGGLALGEDSVGYMQVRLKRHRWHKKVLKTRDPIIMS
IGWRRYQTVPIYSIEDRNGRLRMLKYTPEHMHCLAMFWGPLAPPHTGVVAIQNLSNNQAS
FRITATATVLEFNHAAKIMKKLKLVGTPCKIFKKTAFIQDMFTSDLEIARFEGASVRTVS
GIRGQVKKAAKGEISNKPSKKGGGKEGAIVRCTFEDKIKMGDTVFLRAWIQVEVPRFYNP
LTTALQPRDKTWQGMKTVAELRREHNLQVPVNKDSLYRPVERRPRKFNPLVIPKSLQAAL
PFASKPKDLAPRKRPLLENRRAVVMEPHERKVHALVQHLQLLNTEKTRKRKRKEAEKREV
LAVEKSKEEQISKKRQREERRVRYREEDKMKKKIRRNPQS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacggggaaggcggcgagcagccgcacaagtctcatagggttcgaaaatct
ggagcttccgccaagaagaaatccaagtcgaagccgaattcaaccgaaggcctttctaag
gagctgcagaagataaacaaccctaaggcatttgcattcacttcttctaagaaagccaag
cggctccaatcacgagctacagagaaggaacagaaaaggcttcatttaccaacaattgat
cggaatataggagaacccgctccatttgttgttgtagtccagggacctccacaggtgggg
aagtcattgttgatcaagtgtctggtaaaacattacacaaagcacgacttacctgaagtc
caaggaccaattactatcgtgtcaggcaaacaacggaggttgcagttcgtggagtgtcca
aatgatatcaatgggatgatagattgtgccaaatttgctgatttagctttgctacttatt
gatgggagctatggctttgagatggaaacatttgagtttcttaacatattacaaaaccat
ggatttcccagagtaatgggtgttcttactcacctggacaagtttgaggatgtaaaaaaa
cttaagaaaacaaaacaacgactcaagcaccgtttttggactgagatctatgatggagca
aaattattttacttatctggccttattcatggaaagtacaccaaacgtgaagtacataac
ctagcaaggtttatttctgtaatgaaattcccccccttgtcatggagagcttctcaccct
tacatcttagtagatcgttttgaagatgtcacacccccagagaaggttcacatgaatagc
aaatgtgacagaaatgttacgttgtatggatacttacgaggctgcaatctgaagaagggt
acacgggcacatattgctggcgtgggtgattatcatttgtctggagttacagcattggcc
gatccttgccctcttccctcagttgccaaaaagaaggggctgcgtgataaggaaaagcta
ttttatgcccctatgtctggattaggggaactactttatgacaaagatgctgtctatata
aacataaatgatcactttgtacagttttctaaagatgacggagctaatccagaagggaca
gaaaaaggaaaacaacgtgatgttggtgttgaattggttaaatcattgcagaacactaaa
tattctgtcgatgagaagttggaaaaaagtaatatctcagtttttgggaaaaagcctcac
atatctgaggctccagaagcggttggtcgggatgtgctattggagcctgtagatcactat
gaatctgacattaaagatgaagatagtgattcagatgaagaggatgatactgatgatgaa
aatgatccggaatccttagagaaagatcattcgacacaaagcaactataaggaagagttt
gatttggataggggaagggtgaggagaaaagctgtttttgaaaatgaaatggatattgat
aataaggattctggtgaagatgatgactcagattcaaatgacagtgatgaaacagaaaaa
ggcgatgaagacatgctttctgattctggttcttcagaagataaagaagatgagatgggg
aacatttccaaatggaaggagtccttgttagaacgaacctcctctagacggaatattaat
cttgagcaacttgtttatgggacgtctggatcaaaatcttcagatgatatgaaggatgct
gttgaggaggaaagtgatgaagaattttttaagcccaaaggggaaggaaaaaagaaatca
aatgaaggaataaatgacaacgatgttgacatcgatgactgttcaaaatttgtaagtact
ggaagcctcaaggattggaagaatgaggacttaattgaaagtattcgtgatcgttttgtc
accggaaactggtcgaatgcaaaagcgagaaatgaactctccgaaggaacagttggtgat
gatggtgaagttcttggtgattttgaagacttggaaacaggtcaaaagtacgagggagat
catacagatgatgttggtatctccaacaaggatgatgcattggctgctgaggaacggaag
ctgaaaaagttggctcttcgtgcaaaatttgatgctcaatacaatggttcagaagctcct
gatgaagaagaagatggcaaagatgacaccaagactaatcgtggtcaaagcaatggagat
ggatactctgacacgttaaaggagaaaatggaactgcagaagcaaacaaacattgctgag
cttgccgatgttgatgaagataaacgtgttgagatagaaggtttcagaactgggacttac
cttagaattgaagttcgtgacgtgccctatgaaatggttgataatttcaatccttttcat
ccgattcttgttggtggccttgctttgggggaggacagtgttggatatatgcaggtacgg
ttgaagcggcatagatggcacaagaaagtattgaagactagagaccctataatcatgtct
attgggtggagacgctaccaaactgtaccaatatattctattgaggaccgtaatggtcga
cttcgaatgctcaaatacactccagagcatatgcattgtctggcaatgttttggggccca
cttgctcctcctcatactggggttgttgctatacagaacttatcaaataatcaggcatca
tttaggattactgctactgctacagtcctagagttcaaccatgctgcaaagataatgaag
aagctcaagctagtcggtactccctgtaaaatcttcaagaagacggcattcattcaggac
atgtttacttcagatcttgaaatagctaggtttgaaggtgcttctgttcgaactgttagt
ggaattcgcggtcaagtgaagaaggctgctaaaggagagatttcgaacaagccctctaag
aagggtggaggtaaggagggtgccatcgtcagatgcacattcgaggataaaattaaaatg
ggcgacactgttttcttgcgtgcatggattcaggtggaagtccctcgcttttacaaccct
ctgacaacagccttgcagccgcgtgataagacgtggcagggaatgaaaacagttgccgag
ttgaggagggaacataaccttcaagtgccagttaacaaggattctctctacaggcctgtt
gaaaggaggccgaggaagttcaatccattggttatccccaagtcattacaagcagctctg
ccgttcgcatcaaaaccgaaggacttagctccacgaaaacggccattgcttgagaaccgg
agagctgtggtcatggagcctcatgaaaggaaagtgcacgcacttgtccaacaccttcaa
ctccttaataccgagaagacaagaaaacggaaacgaaaggaggcggaaaagagagaggtg
ctagcagtagagaaatcaaaggaagagcagatctcgaagaagcgacagcgggaggaacga
agggtaaggtatcgagaagaggacaaaatgaagaagaaaatccgcaggaacccacaatca
tga
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