Salvia splendens (scarlet sage): 121782409
Help
Entry
121782409 CDS
T07627
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121782409
Membrane trafficking [BR:
sspl04131
]
Protein recycling
Others
EARP complex
121782409
Endosome - Golgi transport
Tethering complex
GARP complex
121782409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
DUF401
XhlA
LXG
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
121782409
NCBI-ProteinID:
XP_042036175
LinkDB
All DBs
Position
20:complement(17633693..17644255)
Genome browser
AA seq
822 aa
AA seq
DB search
MASSDKQSALDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILAAVRQQSNSGSKARE
DLAAATHAVQELLYKMQEIKSKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQAMASKRQYKEAAAQLEAVNQLCSHFEAYRDFQKITELREKFKSIKQILKSHV
FSDFSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVKNFCSRELTSYQQIFEGAE
LAKLDKTERRYAWIKRRLRTNEEIWKIFPSSWHVSYLLCIQFCKLTRTQLVDILNNLKEK
PDVGTLLLALQRTLEFEEELAEKFGGGSRNKESGSDTGEDTTESSSQTISDIRKKYEKKL
TAHHGSEGEDQDGHKDLSVPDAGFNFRGIISSCFEPYLAVYVELEERTLMEHLEKLVQEE
TWEIEEGSQTNILSSSMQVFLIIRRTLKRCSALTKKQTLFNLFKVFQRILKAYATKLFLR
LPKGGTGLVAAATGMDGQIKTSDKDERLICYIVNTAEYCHTTSGELAENVSKIVDPQYAD
SIDMSEVQDEFSAVITKALITLVHGIETKFDSEMAAMARVPWGTLESVGDQSGYVNGINT
ILTSSIPVLGRLLSPIYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKT
ILLEIPSLGKQVSAASGYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTPSEFQ
RILDLKGLKRTDQQSILDDYNKRGAGTYQQSIKTVVPSAPNTVVAPNQPTPAGIIPLKEE
IVARAAALGRGAATTGIRRILALTESTTKDRKDGPLRKLFIG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatctgacaagcaaagcgctttggattacatcaatcagatgttccccacagag
gcctctctatctggtgttgagccccttatgcagaaaatacacagtgaaatccgtagagtg
gatgctgagattttggccgctgttcgtcagcagagtaattcagggagcaaggcccgggag
gaccttgcagcggctactcatgctgttcaggaactcttgtacaaaatgcaagaaataaaa
tctaaagcagagcaaagtgaaacaatggttcaggaaatatgccgtgacatcaagaaactg
gattttgcaaagaagcatataactactacaattactgcacttcatcgtctcactatgcta
gtatctgctgtagaacaacttcaagctatggcttctaaaagacagtacaaggaggcagct
gcacaacttgaggctgtcaaccagttatgcagtcattttgaggcttatagagatttccag
aagatcacggagctaagagaaaagttcaagagcatcaaacaaattttgaagtctcatgtg
ttctcagatttctctagcttaggtacaggaaaagagaccgaggaatctaatttactccag
cagttatctgacgcatgcctggttgttgatgcccttgaaccatcagttagagaagagtta
gtaaagaatttctgtagtagagagcttacttcataccagcaaatttttgagggtgcagaa
ctggcaaagttggataaaacagaaagacgatatgcttggatcaaacgccgcttacgaacc
aatgaggagatttggaaaattttcccctcttcatggcatgtctcttatctgctttgcatc
cagttctgcaagttgacgaggacacaactggtagacatcctcaacaatctgaaagaaaaa
ccagatgttggaacactgttgctggctttacagcggactttggagtttgaggaagaactt
gcagagaaattcggtggcggaagtcgcaacaaggaatcaggaagcgacactggggaagat
acaactgagagtagcagtcagactatttcagacattcgaaagaaatatgagaaaaagctt
actgctcatcatggaagtgagggtgaggaccaagatggccacaaagatctgtctgtgcct
gatgctgggttcaattttagagggatcatttcatcatgctttgaaccttacttggcggtc
tatgttgaattggaggaaagaactcttatggagcatttggagaaacttgtccaggaagaa
acatgggaaattgaagaggggagtcaaactaatattttatcaagcagtatgcaggtgttt
ttgatcatcagaaggacgttaaagagatgcagcgctctgacaaaaaagcagacattgttt
aatttattcaaggtattccaaagaattcttaaagcgtatgctacaaagcttttcttaaga
ttgccgaagggtggtacaggacttgtagcagctgctacaggaatggatggtcaaatcaag
acatctgacaaggatgaacgtttgatctgctatatagtcaacacagctgaatattgtcac
acaacgtcaggtgaattggctgaaaatgtatccaaaatagttgatccccagtatgctgat
agcatcgacatgtccgaagtgcaggacgagttctcagcagttataacaaaagcattgata
actcttgtgcatggtatagaaacaaagtttgactctgaaatggcagcgatggcacgtgtt
ccttggggcacacttgaaagtgttggcgaccaatcgggatatgtgaatggcataaataca
attctgacttcaagcattcctgtgcttggaaggcttctttctcctatatatttccagttc
ttccttgataagcttgcatcatcgcttggtccgcgcttctatctcaatatcttcaaatgc
aagcaaatctccgaaacaggagctcaacaaatgcttctggatacacaagctgtcaaaaca
atccttctggaaattccttcccttggaaaacaggtatctgctgcttctggatactcgaaa
tttgtgagccgtgaaatgagcaaagctgaagcactgttgaaagtcatattgtcccccatt
gactctgtggccgatacatattgtgctctactgcccgagggtactccttccgagttccaa
cgaattctggatcttaagggcctcaaaaggactgaccagcaaagcatactagacgactac
aacaagcgtggggcagggacgtatcagcaatccattaaaacagtcgttccatcagcacct
aacactgtggtggcacctaatcaacccacacctgctgggatcattccattgaaggaagag
attgtggcaagggctgctgctctggggagaggggctgccacgactggaatccgcagaatc
ctagcattaaccgagtcaactaccaaagatcgcaaggatggacctctgaggaaacttttc
attggatga
DBGET
integrated database retrieval system
