Salvia splendens (scarlet sage): 121782456
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Entry
121782456 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121782456 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121782456
Membrane trafficking [BR:
sspl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121782456
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
121782456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
WDR55
Beta-prop_WDR5
Beta-prop_HPS5
Synaptobrevin
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Dor1
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
121782456
NCBI-ProteinID:
XP_042036243
LinkDB
All DBs
Position
20:2232192..2247477
Genome browser
AA seq
1126 aa
AA seq
DB search
MFTKLFQKPTQPQPSPSSQPDVTQHTMASSEWAPLVAVHYGIPSTASTLAFDPIQGLLAV
GTLDGRIKVIGGGNIEALLISPTALPFKYLEFLQNQGFLVSVSNENEIQVWDLGMRCISS
KIKWESTITAFSVISGTNYIYLGDEYGFLSVLKYDAEEKNIAPLPYHIPPNLIAEGSGIT
LPDHQSIVGVLSQPCLSGNRVLIAYENGSIILWDVTQDKAIHVKGCGDLQLGGGAVVNFS
DSESHTHLNDSLDNEETEKEISSLCWVSPDGSILAVGYVDGDILLWNLSASDGDKGQNSQ
KSPDDVVKIQLSSGDKKLPVIVLHWSSSKAHNGYGGQLFAYGGVDIGAEEVLTILDLNWS
SGLSRLKCIDRVDLNLHGSFADLLVISNSYKADHSNGTSFFVLTCPGQLHFYKYASLSML
KSEKGKNHCMHAAQYNSLIPTVEPYMTVGKLYMMGSEGNVLGSLSKAFSPTKQHPDKILT
GGSTKLPLRGGVPYQISASECYTVERIYIGGYHDGSVRIWDTSLPVLSLVSVLGFEVKGI
EVTGANAPISALDLYPPNLTLAVGNESGLISLYQLQGDSYQATVTIVTETKHQVQHCLPQ
EGNYCSTIYFILSSPVCALRFATSGVRLVAGLECGQIAVLDTGSASVVFVTDCISNSKSP
ITSLSVRTCPTRHNPADKSDNETESASAPEVVFALTKDAQMVLMDCSTGNMISSQPTHPK
EKSIAISMHILDQCHLGDGSKSSVTCSQHTEAQNEASVSIHKNQSGLPNAKAVESNFGHK
MLASQILLCCAEAFYFYTLESLIQGDNNYFYKIEHGKQCSWSTVIKRDEERYGLVVFYQS
GEIELRSLPDLKLLGENSLMSILRWNFKNKMDKTISASEEGQITLVNGCEFALVSLMAYA
DEFRIRKPLPCLHDEVLAAAADADVNYFQNQKKEERALPEFVNNLIKGLKGDKEEQHMNN
AKGREMVIAHLESIFSRFPFSEPFSFEDLELQIDDLDIEEPVPYVASSQKSTGGSKGEEP
VPYVSSSQKSTGGSKDEATERHKLFEGSSTNTKPTVRTTEEIIAKYRNRGDAAGAASQAR
DKLMERREKLEKLSLRTEELQNGAQNFADMASELAKAMEKRKWWNI
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaaattattccaaaaacccactcagcctcaaccttcaccttcttcccagccg
gatgttactcagcacaccatggcgtcttccgaatgggcaccgcttgtcgctgttcactat
ggcatcccatcaactgcatcgactctagcttttgatcccattcaaggcctcttggcagta
gggactctggatggcaggattaaagtgattggtggtggcaacattgaagctcttcttatc
tctcctacagctttaccctttaagtacctagagttcctgcaaaaccaaggttttctagtg
agtgtctccaatgaaaatgaaatccaggtatgggatcttgggatgaggtgtatatcttct
aagataaaatgggaatccactataactgcattttctgttatctccggaaccaattacata
tatcttggagatgagtatggcttcctgtcagtgctaaagtatgatgctgaagaaaaaaac
attgctccattaccataccacattcctccaaatcttattgctgaaggatctgggattaca
ttgcctgatcatcagtccattgttggcgtgctctcacaaccttgtttgtctggaaatagg
gttttgattgcttatgaaaatggttcgattattctgtgggatgttacacaagacaaagct
atccacgttaaaggctgtggagatctgcaactcggaggtggtgcagttgtcaatttttcc
gacagtgagagccacacccatttgaatgattctttagataatgaagaaacagaaaaagaa
ataagctctttgtgttgggtgtcacctgatggatccatattagctgttggttatgtggat
ggagatattttattatggaacttatcagcttctgacggtgataaaggtcagaattcacag
aagtcacctgatgatgttgttaagatacaactgtcgtcaggggataagaagcttcctgtt
attgttctccattggtcatccagcaaagctcataatggttatggaggtcaactctttgcg
tatggtggagtagatattggagctgaagaagtattaacgatccttgacctcaactggtct
tctgggttatcaagattgaagtgcattgaccgtgttgacctcaacctccacggatctttt
gcagatcttcttgtaatatcaaacagttataaggcagaccacagtaatggcacttcattt
tttgttttgacctgtccagggcaattgcatttttataaatatgcttcgctgtctatgtta
aagtctgagaaaggaaagaatcattgtatgcacgccgcacagtataattcactcataccc
actgtagaaccatatatgactgtgggtaagctttatatgatgggttcagaggggaatgtt
cttggctcactctcaaaggcattttcccctacaaagcaacatccagataaaatactgacc
ggtgggagtacaaagttgcctcttagaggtggtgttccttatcaaatttctgcaagcgaa
tgctatactgttgagagaatttatataggagggtatcatgatgggtctgtacgaatctgg
gataccagtttacctgttctgtcacttgtttctgttttaggatttgaggtaaagggtatt
gaagttactggtgctaatgctccaatatcagcattggatttgtatcctccaaacttaacc
ttagctgttggcaacgaatctggtttgatttccctttatcagctacaaggagactcttat
caagcaacagttaccatcgtaactgaaacaaaacatcaagttcaacattgcctacctcaa
gagggaaattattgttctaccatatatttcatccttagttctcctgtgtgtgccttaagg
tttgctacttctggagtcagacttgttgctggattagaatgtggacagattgcagtgctt
gacaccggttcagcttcagttgtatttgttacagactgtatatctaactcaaagtctcct
atcacatctctctctgttagaacgtgtccaactcgtcataacccggctgacaaatctgac
aatgaaactgaaagtgcatctgctccagaggttgtgtttgccctgaccaaagatgctcag
atggtcttgatggactgttccacaggaaatatgatcagttcacagccaactcatccaaag
gaaaagtctattgcaataagcatgcatatattagaccagtgtcatcttggtgatgggtcc
aaaagttctgttacatgctcccagcataccgaagctcagaatgaggcttcagtatccatt
cataagaatcagagtggtttgccaaatgctaaagcagtggagtctaattttgggcacaag
atgctggcatctcaaattttactttgttgtgcggaagccttctacttttacactttagag
tctttgattcagggggataataactatttctacaaaatagaacatggaaaacaatgttcc
tggagtacagtcatcaagagagatgaagaaagatatggactggtagtattctatcaaagt
ggagaaattgaactcaggtctttaccagatcttaaactgctgggtgagaactcattgatg
tcaatactaaggtggaacttcaagaacaaaatggacaagacaatcagtgcttctgaggaa
gggcagattacgctggtcaatggttgtgaatttgctcttgtatctcttatggcatatgcg
gatgaattcaggattcgtaagccgttgccttgcctacacgatgaagtccttgctgcagct
gccgatgctgatgttaactactttcaaaatcaaaagaaggaagagagggctctgcctgag
tttgtgaataatctgataaagggattgaaaggtgataaggaagagcaacatatgaataat
gcaaaaggtcgtgagatggtgattgctcatttagaatctatattctcacggtttccgttt
tctgaaccctttagttttgaagacttggaacttcaaatagatgaccttgatattgaagag
cctgttccttatgtagcatcttcacaaaagagcaccggtggctcaaaaggtgaagagcct
gttccttatgtatcatcttcacaaaagagcaccggtggctcaaaagatgaggcaactgag
cggcataaattattcgaaggtagttctaccaacactaaaccgacagtacgtacaacagaa
gaaatcattgcaaaatataggaacagaggggatgcagcaggtgcagcatcacaagcaagg
gataaacttatggaacgccgagagaaacttgagaaactcagcctgcgcactgaagagcta
cagaacggtgctcagaactttgcggatatggctagtgagcttgctaaggctatggaaaaa
cgtaaatggtggaacatctga
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