KEGG   Salvia splendens (scarlet sage): 121782643
Entry
121782643         CDS       T07627                                 
Name
(RefSeq) uncharacterized protein LOC121782643
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03022  Basal transcription factors
sspl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121782643
  09124 Replication and repair
   03420 Nucleotide excision repair
    121782643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121782643
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121782643
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121782643
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121782643
SSDB
Motif
Pfam: MAT1 DUF3867 SUN
Other DBs
NCBI-GeneID: 121782643
NCBI-ProteinID: XP_042036508
LinkDB
Position
20:7645777..7648538
AA seq 188 aa
MVVSAANAFAKEMSIRKRIAGIYNKREEDFSSLREYNDYLEEVEDMIINLVEGINVPAIE
ARISEYQRENAEQIMNAQARKAEEYASALAASKGQVQTTGIDVSSGSQAGTSNVPQGQYA
PAVAGGIAQPRPMGIPNPLGSGHDMMGLEYEDEETRRIRAEKAARAGGWSFEISKKRALE
EAFASIWV
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtggtttctgcagcgaacgccttcgccaaggaaatgagcataagaaaaaggattgct
ggcatatacaataaacgagaagaggacttctcatcgttgcgtgaatacaatgactacttg
gaagaggtagaagatatgataattaatttagtcgaggggataaatgtccccgctatcgaa
gcaagaatttccgagtaccagagagaaaacgctgagcagatcatgaacgctcaagctcgc
aaggctgaggaatatgcatctgctttagcagcaagcaaaggacaagttcaaacaactggc
atcgatgtttcctccggctcccaagctggcacgagcaatgttccgcaagggcaatacgca
cctgcggttgctggagggattgcacagcctcggccaatgggcatacctaacccacttggg
tcgggtcatgacatgatgggacttgaatacgaagatgaagaaacaaggagaatccgagca
gagaaggccgctagggcgggtggatggagttttgagataagcaagaaaagggctcttgaa
gaagcttttgctagcatttgggtatga

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