Salvia splendens (scarlet sage): 121782793
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Entry
121782793 CDS
T07627
Name
(RefSeq) single-strand DNA endonuclease 1-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121782793
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121782793
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Chromo
Nebulin
Chromo_shadow
Motif
Other DBs
NCBI-GeneID:
121782793
NCBI-ProteinID:
XP_042036674
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All DBs
Position
20:complement(27505521..27510025)
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AA seq
618 aa
AA seq
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MGVKNLWDILETCKKTLPLHHLQNKRVCVDLSCWIVQLQNVNRSHCPLKDKLYLKSLFHR
LRALLALNCSLIFVTDGSIPGIKLSTYRRRLNTGNEAMPIVHAKHTSQNVSSLKRNMGSE
FSCMIKEAKLLGIALGIQCLDGIEEAEAQCALLNAESLCDGCFTSDSDAFLFGARTVYRD
ICLGEGGYVTCYEMDDIERELGFGRDSLITLAILLGSDYTQGIRGVGPEYACQLVRAAGD
SSVLQRLASEGLSFAKKPKNSKKKGKISEGENKENYVDNKRDFNGNESDFPMENQFSQVI
NAYMKPKCHSADSDAVNRALALYQVNNNQLHQICAQYFDWPPEKTDEYILPKIAERNLRR
FANLRVTSSKLDLHMPINEMPVKCPISRIIKQRKIQGRDYFEVSWEDMDEVEASVVPADL
VQSACPEKIMEFRELKAQKQMPSRKPRQKQKQDTKELDRKLQQLVDEIEKESTTSNAIGE
TKIDAPTSRQKTVDIEEIDGKLQELIIDTEKESSSSGSTNPRGGMLQQQRMMHFGTSIGG
CSAAAEVIDLISPLPPRRCPVSKPQECVEVIELSDTENDATPQHARKMVREQVSTAYGDY
LYKKSDNCASKISVICFD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaatctgtgggatatcttggaaacttgcaagaaaactctcccccttcat
catctccagaacaagagggtgtgtgtggatttgtcgtgttggattgttcagcttcaaaat
gtgaacagatcccactgtccattgaaagacaagctctatttgaagagtctcttccaccgc
ctcagagccctccttgctttgaattgcagccttatcttcgtcaccgacggctcaattccc
ggtatcaaattatctacatataggcgccgcttgaatactggaaatgaggcaatgcctatt
gtacatgctaagcatactagtcaaaatgtatcatctttgaaaagaaatatgggatctgaa
ttttcttgcatgatcaaagaagccaaattactgggcattgcccttgggattcaatgccta
gatgggattgaggaggctgaagctcaatgcgctttgctgaacgcagaatcattatgtgat
ggatgttttacatcagattccgatgcttttctgtttggtgcaagaacagtttatagagac
atttgtttgggagaaggtggttatgttacttgctatgaaatggacgatattgagagagaa
cttgggtttggaagggattccttgattactcttgctattcttctggggagcgattacacc
caaggaattcgtggggttgggccggagtatgcttgtcagcttgtgagagctgctggtgat
tcgtctgttcttcagcggcttgcatcagagggcttgtcatttgcaaagaagccaaaaaac
tcaaaaaagaagggcaaaattagtgagggtgaaaataaagagaattatgttgataacaag
agggattttaatgggaacgaatctgattttccaatggaaaatcaattctcgcaagtgata
aatgcatacatgaagcccaagtgtcattcagcagactcagatgcagtgaacagggctctt
gctctctatcaagtcaacaacaaccagctgcatcagatttgtgctcaatatttcgactgg
ccgcctgaaaagacagatgagtacatccttccgaagattgctgaaagaaacttgaggcga
tttgctaaccttcgcgtcacttcttccaaattagacctccatatgccaatcaacgagatg
ccagtgaaatgtcctatatctaggattatcaagcaaagaaaaatccagggaagggactat
tttgaggtttcgtgggaagacatggatgaagtggaagcatcagttgtacctgctgatctt
gtgcagagtgcttgccctgaaaagatcatggagttccgggagctaaaagctcagaaacag
atgcccagtcgtaaaccaagacagaaacagaaacaagacacaaaggaactcgacagaaag
ctccaacaactggtggacgagattgagaaggagagcaccacctcgaacgccattggagag
acgaaaatagatgctcccacatcgagacagaagacggtcgacatcgaggaaatcgatgga
aagcttcaggaactgatcatcgacacagaaaaggagagcagtagtagcggctcgactaat
ccaagaggaggaatgcttcagcaacagaggatgatgcactttggtaccagcattggtggt
tgctctgctgctgcagaagttattgatctcattagtccgctgccaccacgacgatgtccg
gtgtcgaagccccaagagtgtgttgaggtgattgagctgagtgatacggagaatgatgcc
acacctcaacatgcaagaaaaatggttagagagcaagtctcaacagcatacggtgactac
ctttataaaaaatctgataactgtgcttctaaaattagtgtgatttgttttgattaa
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