Salvia splendens (scarlet sage): 121782875
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Entry
121782875 CDS
T07627
Name
(RefSeq) peroxisome biogenesis factor 10-like isoform X1
KO
K13346
peroxin-10
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121782875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121782875
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
121782875
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121782875
NCBI-ProteinID:
XP_042036793
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Position
20:19304983..19308870
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AA seq
389 aa
AA seq
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MGITEAAAVMGDASSSNTSDAGPSGSGGGVRTFPLAAQPEIMRAAEKDEQYASFVYDACR
DAFRHLFGTRVAVAYQSETKLLGQMLYFLLTTGAGKQTLGEEYCDITQVAGPHGLPPTPA
RRSLFILYQTAFPYIAERISSRIASRGLTMADLLSNDAMEVESTSSSQIQVSGNAEVTSS
SLSRLKARIAGMWSSAVRRLPSVLPIGRELFMLLLRTNLMFFYFEGLYYHLSKRASGIRY
VFIGKPTNQRPRYQILGVFLLVQLCIIAAEGLRRSNLSSLATSIQPTSLGDYRTSTGRGL
PVLNEEGHLIADESAKTSLVTESTSNSESQVLSKCTLCLSNRQSPTATPCGHVFCWNCIM
EWCNEKPECPLCRSPVTHSSLVCLYHSDF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggggattacagaagcagctgcggtcatgggagatgccagcagcagcaacacctcggat
gccggacctagtggaagcggcggcggcgtacggacctttccgctggcggcgcagccagaa
ataatgagagcagctgagaaggacgagcagtacgcctccttcgtctacgacgcctgccgc
gacgccttccgtcacctctttggtacaagagttgctgttgcatatcagagtgagacaaag
cttttgggccagatgctctatttcctattaaccactggtgcaggaaaacagacccttgga
gaagagtattgtgacatcactcaggttgcaggaccacatggacttcctccaactccggca
aggcgctctctatttattctttaccagacagcattcccgtatattgctgaaaggataagc
tcgcgtattgcttcccgaggccttactatggccgatttactatctaacgacgccatggaa
gttgaaagtacctcaagcagtcaaattcaggtatctggaaatgctgaagttacatcatct
agtttgtcaagattgaaagccagaatagcaggaatgtggtcttctgcagttcggaggttg
ccctcagtgctacctataggccgtgagcttttcatgctacttcttcgcacaaacctcatg
ttcttttattttgaaggcctgtattatcatttgtcaaaacgagcctctggaattcgttat
gtgtttattggaaaaccaaccaatcaaaggcctagatatcaaatattaggcgttttcctt
ctagttcagctctgtataattgctgcagaaggattaaggaggagcaatttatcttctctt
gcaacttctattcagccaacatcccttggagattatcgaacttcaacaggaagaggttta
cccgttttgaacgaggaaggtcatctcatagctgatgagtctgcaaagactagtttagta
acagaatctacatctaattcagagtctcaagtgctgagcaaatgcacactctgcctgagc
aatcgccagtccccaacagccactccttgcggccacgtgttttgctggaactgcattatg
gagtggtgcaatgagaagccagagtgccctctttgtcgttcgcccgtgactcattctagc
ctcgtttgcttgtaccattccgatttttag
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