Salvia splendens (scarlet sage): 121782953
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Entry
121782953 CDS
T07627
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121782953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121782953
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121782953
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
DUF357
C2H2-zf_KIN17
Motif
Other DBs
NCBI-GeneID:
121782953
NCBI-ProteinID:
XP_042036900
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All DBs
Position
20:complement(3606922..3609642)
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AA seq
357 aa
AA seq
DB search
MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSRVEKDLDEVLQSHTVYS
NVSKGVLAKSKDLVQAFGTDDQTKVCLEILEKGELQVAGKERESQLSNQFRDIATIVMQK
TYNPETKRPYTISMIERLMHDIHFAVEPNSSSKKQALEVIRELQKLYPIKRSPMRLRLTV
PEKNMPSLLEKINGWNATIVSRDESGSQLSVICELEPGFFRDCDALVRSLQGRLDILAVN
VHLDSDTHVDHYDDLEEESSSVQVVSKAPVVQLTEKLQKQTISSNEGSSQGEVKQQKCNT
CNAFVGDAKEYREHFKSEWHKHNMRRKTRQLPPLSAEECMGDMEIIDSKADLKDYLF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacactcgtgcagcctgtagggcagaagaggctgacgaacgtcgcggtggtg
cgtctcaaaaaacacggaaaccgcttcgaaatcgcttgctacaagaacaaagtcctctct
tggcgctcacgcgtagagaaagacttggatgaagtgttgcagtcacataccgtgtattcg
aatgtttcgaaaggtgttctagctaagtcgaaagatttagtccaagctttcgggacagat
gatcaaactaaagtttgtttggagattttggagaaaggagagctgcaagttgcagggaag
gagagggagtcccaattatccaatcaatttagggatattgcaactatagttatgcagaag
acttataaccctgaaactaaacgaccttataccataagcatgattgagcgtctaatgcac
gacatacattttgccgtggaaccaaatagcagctcaaagaaacaggcattagaagtcata
cgtgagctccaaaagctgtatccaatcaaacgatcacccatgagactgcgattaactgta
ccagaaaagaacatgccatcacttttggaaaagattaatggttggaatgctaccattgtt
tcaagagacgaatcaggaagtcagctgtctgttatttgtgaactggaaccaggttttttc
cgtgattgtgatgctttagtgaggagcctgcagggaagattggacattcttgcagtgaac
gtgcacttggatagtgatacacatgtggatcactatgatgatcttgaggaggaatcatca
agcgtgcaggtcgtctctaaggcccccgttgttcaactgactgaaaaactgcagaagcaa
acaatttcctcgaacgaggggagttcccagggagaggtaaaacagcaaaaatgcaacacc
tgcaatgcctttgttggtgatgcaaaggagtatcgagagcactttaagagtgaatggcac
aagcacaacatgagacgaaagacgaggcagctccctccccttagtgctgaagaatgcatg
ggtgacatggaaatcatcgactccaaagctgatctcaaggactacttattctga
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