Salvia splendens (scarlet sage): 121782972
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Entry
121782972 CDS
T07627
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121782972
04121 Ubiquitin system [BR:
sspl04121
]
121782972
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121782972
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121782972
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121782972
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-Nse
zf-C3HC4_3
zf-RING-like
zf-RING_16
VPS18_RING_C
Anti-TRAP
zf-C2HC_3
DZR_2
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
121782972
NCBI-ProteinID:
XP_042036921
LinkDB
All DBs
Position
20:complement(4409776..4411603)
Genome browser
AA seq
341 aa
AA seq
DB search
MHLLFQLSFHFLHNYIYRQSMSLSPPRANGNASFNLYWCYQCHRTVRTASDDPSSIVCPR
CLGQFLYEIDMARPQPILEITAFDPSPEARIVEALALMLDPHSLTGQTRGLGRRRRSHRE
PEEAGNRRWFRRRRPSIDEEDDDDWGPESGIIARPRAWIVLRPTGRIPANRNRPRERLIP
QGVDPRNYFTGPGLQGLIEEITQNDRPGPPPAPDSAIDAIPTIKIAQTHLETDTECPVCK
EELEVGLEARQLPCKHIFHSDCIVPWLRLHNSCPVCRHEVEIPNQTCEDESSQVSVEDRR
CPQLRRLAGMWPFRSRYRPLRPRGDGPRHHNAAETWRCNIM
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcctgtttcagctatctttccattttctgcataattatatttacagacagtcc
atgtctttgagccctccaagagccaacggcaatgctagcttcaacctctactggtgttac
cagtgtcatcggactgtcaggaccgcgtccgatgacccatccagtatcgtctgcccccgg
tgcctcggccagtttctctacgaaatcgacatggcaaggcctcaacccattcttgaaatc
accgcatttgatccctccccggaggcacgaattgtcgaagcactggccctcatgcttgat
cctcactcacttacaggccaaacacggggacttgggcggcgaagacgaagtcatagggag
ccagaagaggcaggaaaccgaagatggttccggaggaggcgtccttcgatcgatgaggag
gacgatgacgattggggtccggaaagcgggattatagcccggcccagagcctggattgtt
ctccggcccactggccgtatccctgcaaacagaaacaggccgagggaaaggctaatccca
cagggagtagaccctagaaactacttcaccgggccgggactgcaagggctaatcgaggag
ataactcagaacgacaggcccggcccgccaccagctccagattcagctattgatgctatt
ccaacaattaaaattgcacaaacacatctggagacagacacggaatgcccagtttgcaag
gaagaattagaagttgggttggaagcaagacagttaccatgcaaacatatctttcattct
gactgcattgttccatggctaaggctccataattcttgcccagtatgccgtcatgaagtc
gagattcctaaccaaacttgtgaggatgaatccagccaagtttctgttgaagacaggagg
tgcccacagctgaggcggctggcaggcatgtggccgttccgctccagatatcggccactt
cgcccacgtggagatggtcccagacatcacaatgcagctgaaacatggaggtgtaatata
atgtag
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integrated database retrieval system
