Salvia splendens (scarlet sage): 121783010
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Entry
121783010 CDS
T07627
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121783010
03083 Polycomb repressive complex
121783010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121783010
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121783010
Histone modification proteins
HAT complexes
HATB complex
121783010
HDAC complexes
Sin3A-HDAC complex
121783010
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121783010
PRC2.2
121783010
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121783010
Heterochromatin formation proteins
Other heterochromatin formation proteins
121783010
Chromatin remodeling factors
NuRD complex
121783010
NuRF complex
121783010
NuRF complex (fruit fly)
121783010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
121783010
NCBI-ProteinID:
XP_042036979
LinkDB
All DBs
Position
20:complement(2509765..2528208)
Genome browser
AA seq
460 aa
AA seq
DB search
MKERAAERTVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQIEQATYKNRQRLYLS
EQTDGSVPNTLVIANVEVVKARVAAAEHISQFNEESRSPFVKKSKTIIHPGEVNRIRELP
QNSNIVATHTDSPDVLIWDVESQPNRQPVLGATPSRPDLILTGHQDNAEFALAMCPTEPF
VLSGGKDKSVVLWSIHDHISSLAADQSAHKSTGSKGNLSNGKAGDGTAVEARGIFQGHGD
TVEDVQFNPSSAQEFCSVGDDSCLILWDARTGSSPVVKVEKAHNADLHCVDWNPNDVNLI
LTGSADNTVHMYDRRNLTSGGVGAPVHIFEGHSAAVLCVQWSPAKASVFGSAAEDGILNI
WDHAKIGKAGNDVRSGDSSYPPGLFFKHAGHRDKVVDFHWNAADPWTIVSVSEDGEKTGG
GGTLQIWRMIDLIYRPEEEVIAELDKFKSHLLTCSTSSSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagcggctgagcgcacagtagaggagcgctacacgcagtggaagtcgctc
gtaccagttctctacgactggttggccaatcacaatctcgtttggccgtccctctcctgc
cgttggggacctcaaatagagcaagcaacatacaagaatcgtcaaaggctatatctttcg
gaacagacagatggcagtgttccaaacacactagtcatagcaaatgttgaagttgtaaaa
gctagggttgcagcagcagagcacatatcacagtttaatgaagaatcacgatcacctttt
gtgaagaagagcaagaccataattcatcctggagaggtgaatcgaatcagggaactgcca
cagaatagcaatattgtggctactcacaccgatagtcctgatgttctcatttgggatgtc
gaaagtcagcctaatcgtcaacccgttttaggtgccacaccatcacgccctgatttgata
ctgactggacatcaagataatgctgaatttgcactagccatgtgtcctacagaaccattt
gtgctctctggaggcaaggacaagtccgtggtgttgtggagcatccacgaccatatatct
tctttggctgcagatcagagtgctcataaatctacaggttcgaagggtaatttatctaat
ggaaaagctggtgatggaacagctgttgaagcacgtgggatatttcaggggcatggggac
actgtcgaagatgtccaatttaacccatcaagtgcacaggagttctgcagtgttggtgat
gattcttgcctgattctgtgggatgcaagaactggctcttctcctgttgtcaaggttgaa
aaagctcacaatgccgaccttcactgtgttgattggaatcccaatgatgtgaatctgatt
ttgacagggtctgctgataatactgttcacatgtatgatcgccgaaatcttacttctgga
ggagtcggagcccctgttcatatttttgaaggccattctgctgcggtgctttgtgtccag
tggtctccggctaaagcatctgtctttggtagtgctgcagaggatggcatcttaaatata
tgggatcatgcaaagatcggaaaggccggaaatgatgttagatctggagattcgagctat
ccccctggcttattttttaaacatgctggtcacagggacaaggtggttgattttcactgg
aatgcagcagatccgtggactattgttagcgtgtctgaggatggagaaaagactggtggg
ggaggcacactgcagatttggcggatgatcgacctaatttatcgaccagaagaggaggtg
atagctgagctggataagttcaaatctcatcttttgacgtgctccacttcatccagttcc
tga
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