Salvia splendens (scarlet sage): 121783052
Help
Entry
121783052 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121783052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121783052
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121783052
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121783052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_4
DUF7567
Motif
Other DBs
NCBI-GeneID:
121783052
NCBI-ProteinID:
XP_042037025
LinkDB
All DBs
Position
20:24307845..24309621
Genome browser
AA seq
319 aa
AA seq
DB search
MPTIETENVECVYASDGVEDEEISSHFFTKKHYSSKPHNLLSSVITPTSVHELLECPVCT
NSMYPPIHQCHNGHTICSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLG
CPEIFPYYSKPKHEAVCNFRPYSCPYAGSECIVTGDIPDLVAHLRDDHKVDMHSGCTFNH
RYVKSNPREAENATWMLTVFNCFGQYFCLHFEAFQMGMAPVYMAFLRFMGDEVEARNYSY
SLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRI
WKEHQNPDSAGACVPSLST
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaattgaaacagaaaatgtggagtgtgtttatgcatcagatggagttgaggat
gaagaaatatcttcacattttttcaccaagaaacattattcttcaaaacctcataatttg
ttatcttctgtgattacccctactagtgttcatgaattgctggagtgccctgtttgcaca
aattccatgtaccccccaatccatcagtgtcacaatgggcacactatctgttcgacatgc
aaggcacgggtgcataaccggtgccctacctgcagacaagagctaggggacatcaggtgc
ttggcgcttgagaaggttgcagagtcgctagagctgccctgcaggtactactcgctaggc
tgcccggagatattcccatactacagcaaacccaaacacgaagcagtttgcaatttccgg
ccatatagttgtccatatgctggatcagaatgtatagtaacaggagacattcctgatctc
gttgctcacttgagagacgaccataaagtggacatgcactcaggatgcacgttcaatcac
agatacgtgaagtcaaatcctcgtgaagcagaaaatgcgacatggatgttgactgtattc
aattgttttgggcaatatttctgccttcactttgaagcatttcagatgggaatggcacct
gtttacatggcgttcctacgattcatgggcgacgaagttgaagcccgaaactatagctac
agcttagaggtaggaggaaatggtagaaagctcacatgggaaggcaccccacgaagcatt
agagatagtcaccgtaaggttagggatagccacgacggtcttatcatccaacgcaacatg
gcactcttcttctccggaggcgacaagaaggagcttaagctcagagttaccggaaggatc
tggaaggagcatcagaatccagattctgctggggcttgtgtacctagtctttctacctaa
DBGET
integrated database retrieval system
