Salvia splendens (scarlet sage): 121783082
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Entry
121783082 CDS
T07627
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121783082
09122 Translation
03013 Nucleocytoplasmic transport
121783082
03015 mRNA surveillance pathway
121783082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121783082
03041 Spliceosome [BR:
sspl03041
]
121783082
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
121783082
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
Cap binding complex
121783082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
121783082
NCBI-ProteinID:
XP_042037069
LinkDB
All DBs
Position
20:7945825..7948830
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AA seq
252 aa
AA seq
DB search
MASLFKDPTKLSAYRDRRFSGTQEEYEEALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKMIMGLDKNSKTPCGFCFVMYYSREDAEDTVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKIVQKELEAQRQLVDYGAGSLDSFAPVMQPNYGRQG
GNYGQGGSYRSRDYPRKRHREDDRRGSDFQRRKSDFVYRRNPDNDSRAEKNPRFRESGDS
DEEDDDDRKRSL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcctcactcttcaaggatccgaccaaattgtcggcgtatagggacagaaggttttcc
gggacgcaggaagagtacgaggaggcgctactgacctcgaccaccgtttacgtgggaaat
atgtcgttttacacaacggaggagcaggtctacgagctgttctctcgggcgggggagata
aagaaaatgatcatgggtttggataagaacagcaagactccttgcggattctgcttcgta
atgtactactccagagaagatgctgaagatactgtgaaatatatcagcgggactattctg
gatgaccgtcctattcgtgtcgactttgattgggggtttcaagaaggcagacaatgggga
cgtgggcggagtggtgggcaggtgcgggatgaatatcgtacagactatgacccaggtaga
ggtggttatggaaaaatagtccagaaagagttggaagcccagagacagctagtcgattat
ggtgctggatcgctagattcatttgcacctgtcatgcaaccaaactatggtaggcaaggt
ggaaactacggtcaagggggctcctaccgcagcagagattacccacgcaagcgacacaga
gaagatgaccgccgtgggtcagattttcaaaggagaaagtcagacttcgtatatcggaga
aatccagataatgattccagagctgaaaaaaatccgcgatttcgggagagcggcgattcg
gacgaggaggatgatgatgatcggaagcggtcgttgtag
DBGET
integrated database retrieval system
