Salvia splendens (scarlet sage): 121783342
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Entry
121783342 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121783342
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121783342
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121783342
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121783342
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121783342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
SDP_N
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121783342
NCBI-ProteinID:
XP_042037322
LinkDB
All DBs
Position
21:complement(22081017..22084061)
Genome browser
AA seq
306 aa
AA seq
DB search
MADSPRKRYVRSPSPWEENSRSRSRSRSKSRSRSRSWSRPRERSRSRSRSRGRGTGREEV
VNDGTTLYVTGLSTRVTEKELEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVNMVTSDDAN
RCIKHLNQSVLEGRYITVERVFWLYSEDIASAMLAEIKDDQSIHRNKLKQLNSIYIAPTT
LQPQRILNSQLIKRFCQHCNQAFMSRRKRARTPTPGHYLGLKSSRGDGYGDRGRYRGGSS
REDYGYRRSPRRSPYRGGRDYSPRGGRDYSPRHSPYGGSGRSRRERSRSYSPPRHSPERN
YARGSR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctccgagaaaacggtatgtacgctctccttctccatgggaagaaaattcg
agatccaggtcaagatctaggtccaaatccagatctcgttctagatcatggtcaagacca
agggagagatctagatcaaggtctaggtcaagaggtcgtggcactggcagggaagaagtt
gttaatgatggaactacactttatgttactggcctatctacaagggtcactgagaaagaa
cttgaagatcatttctcaaaggaaggaaaggttaagtccgtctttttggttgtggagcct
cgatctcgtgtatctcgtggatttgcttttgtcaatatggtcacttcagatgatgctaat
cgatgtatcaaacacctcaatcagtcggtgcttgaaggccggtacataactgtagagagg
gttttctggttatattcagaagatattgcatcagctatgttggcagaaatcaaagatgat
cagtccatccatcgcaacaagctaaaacaactaaatagcatctatattgccccaacaact
ttacaacctcagcgaatactcaactcccaattaatcaagcgtttttgtcaacattgtaat
caggcttttatgtcacggcggaaacgtgcaaggactcccactcctggtcattatcttggt
ctgaaaagttcacggggtgatggttatggtgatcgtggaaggtatcgtggaggatccagc
cgcgaagattatggctacaggaggtctcctagacgctcgccatatagaggtgggcgtgat
tactctcccagaggtggacgtgattactctcccagacattctccttatggtggaagtgga
agatcaagaagggaaaggtccaggtcatactctcctccccgacacagccctgaaaggaac
tatgcacgtggttctaggtga
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